fastglmpca: Fast Algorithms for Generalized Principal Component Analysis

Implements fast, scalable optimization algorithms for fitting generalized principal components analysis (GLM-PCA) models, as described in "A Generalization of Principal Components Analysis to the Exponential Family" Collins M, Dasgupta S, Schapire RE (2002, ISBN:9780262271738), and subsequently "Feature Selection and Dimension Reduction for Single-Cell RNA-Seq Based on a Multinomial Model" Townes FW, Hicks SC, Aryee MJ, Irizarry RA (2019) <doi:10.1186/s13059-019-1861-6>.

Package details

AuthorEric Weine [aut, cre], Peter Carbonetto [aut], Matthew Stephens [aut]
MaintainerEric Weine <ericweine15@gmail.com>
LicenseGPL (>= 2)
Version0.1-103
URL https://github.com/stephenslab/fastglmpca
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("fastglmpca")

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fastglmpca documentation built on May 29, 2024, 10:49 a.m.