Man pages for fluxfixer
Advanced Framework for Sap Flow Data Post-Process
| calc_dtmax | Calculate dTmax by various methods |
| calc_dtmax_dr | Calculate dTmax by the double regression method |
| calc_dtmax_ed | Calculate dTmax by the environmental dependent method |
| calc_dtmax_mw | Calculate dTmax by the moving window method |
| calc_dtmax_mw_dr | Calculate dTmax by the moving window and double regression... |
| calc_dtmax_pd | Calculate dTmax by the daily predawn method |
| calc_dtmax_pd_ed | Calculate dTmax by the daily predawn and environmental... |
| calc_dtmax_sp | Calculate dTmax by the successive predawn method |
| calc_fd | Calculate sap flux density time series |
| calc_ref_stats | Define reference values of average and standard deviation |
| calc_sw_in_toa | Calculate global solar radiation time series at TOA |
| check_absolute_limits | Remove outliers by absolute limits |
| check_short_attenuation | Detect periods when short-term signal attenuation occurs |
| dt_gf | Quality-controlled and gap-filled dT time series |
| dtmax | dTmax time series estimated by multiple methods |
| dt_noisy | Raw dT time series with various artifacts |
| fill_gaps | Fill missing values with a random forest model |
| filter_highfreq_noise | Filter high frequency noise by Gaussian filter |
| fluxfixer-package | fluxfixer: Advanced Framework for Sap Flow Data Post-Process |
| get_interval | Obtain time interval of input timestamp vector |
| interpret_qc | Convert the decimal QC flag into a human-interpretable... |
| modify_short_drift | Modify short-term drifts |
| n_valid | Obtain the number of data points without missing values |
| pipe | Pipe operator |
| remove_manually | Remove error values manually |
| remove_rf_outlier | Remove outliers detected by a random forest model |
| remove_zscore_outlier | Remove outliers by Z-score time series |
| retrieve_ts | Retrieve time series in its original units |
| rf_fit | Tune hyperparameters used in a random forest model |
| rf_pred | Predict targeted time series by a random forest model |
| run_fluxfixer | Run all quality control processes automatically |
