Man pages for icmstate
Interval Censored Multi-State Models

ageqbCheck if event time is larger/equal than other event time
agreaterbCheck if event time is larger than other event time
ainBCheck if event time is contained within half-open interval
AintersectbCheck if half-open intervals intersect with event times
AlargerbCheck if closed interval is contained in half-open infinite...
AsubsetBCheck if closed interval is contained in other closed...
binary_search_largerBinary search - Larger
binary_search_larger_equalBinary search - Larger or equal to
ChapKolm_fwd_matFunction to use
direct_from_observed_intervalsTranslate observed transition intervals into direct...
EM_multinomialHelper function for npmsm()
EM_poissonHelper function for npmsm()
EM_solverEM solver for extended illness-death model (Frydman 1995)
estimate_support_msmEstimate the support of a general Markov interval-censored...
evalstepSample from a markov chain multi state model with exactly...
existenceNPMLECheck existence of NPMLE
get_trans_intervalsGet transition intervals from specified data
graphfromIntervalsConstruct Graph from censoring/truncation intervals
icmstate-packageicmstate
interpol_msfitGiven a 'msfit' object, linearly interpolate the cumulative...
msm_frydmanDetermine NPMLE for Multi State illness death Markov model...
npmsmNPMLE for general multi-state model with interval censored...
plot.npmsmPlot a "npmsm" object
plot_probtransPlot the transition probabilities for a fitted 'npmsm' model
plot_survPlot the transition specific survival probabilities for a...
print.npmsmPrint a "npmsm" object
probtrans_weibDetermine transition probabilities for a multi-state model...
prod_lambda_G_baseCalculate the product of intensities over interval decided by...
remove_redundant_observationsRemove redundant observations from supplied data frame
sim_id_weibSimulate panel data from an illness-death model with Weibull...
sim_weibmsmSimulate multiple trajectories from an interval-censored...
support_from_direct_intervalsEstimate support of multiple transitions given direct...
support_frydmanFind support for Illness-death model. Only applicable to...
supportHudgensDetermine the support of the NPMLE for interval censored...
support_npmsmNumerically find the support of the transitions from a...
transprobWrapper for the 'probtrans' function
visualise_dataVisualise data for illness-death model, only applicable to...
visualise_msmVisualise multi-state data
icmstate documentation built on April 3, 2025, 8:06 p.m.