Man pages for kgraph
Knowledge Graphs Constructions and Visualizations
| build_kgraph | Build a knowledge graph |
| build_kgraph_from_fit | Build a knowledge graph from a fit object |
| compound | Assignment pipe |
| cov_simi | Covariance similarity |
| df_cuis_pairs | A dataset containing CUIs pairs |
| df_embeds_dict | A dictionary for the m_embeds object |
| df_phecode_pairs | A dataset containing Phecode pairs |
| df_pval | A dataset containing GWAS p-values |
| df_pval_dict | A dictionary for the df_pval object |
| exposition | Exposition pipe |
| fit_embeds_kg | Fit embeddings to a kgraph object |
| fit_embeds_to_pairs | Fit embeds to pairs |
| gen_df_notpairs | Generate null pairs |
| get_cutoff_threshold | Get cut-off threshold |
| get_sgraph | Wrapper to build a sgraph object fromk a kgraph object |
| m_embeds | A dataset containing medical word embeddings |
| pipe | Pipe |
| project_pairs | Predict known pairs |
| reshape_multiple_traits | Reshape multiple traits in example data |
| reshape_multiple_traits_dict | Reshape multiple traits in example data dictionary |
| sparse_encode | sparse_encode |
