Man pages for linelistBayes
Bayesian Analysis of Epidemic Data Using Line List and Case Count Approaches
| backnow_cm | Get Bayesian Back-calculation Estimates and Model Diagnostics |
| convert_to_linelist | Convert Case Counts to a Line List |
| create_caseCounts | Create a Case Counts Data Frame |
| create_linelist | Create a Line List from Report and Onset Dates |
| dnb | Calculate Log-Probability Density for Negative Binomial... |
| dummy | Generate Dummy Variables Matrix for Weeks and Weekends |
| findmiss | Locate Missing Values in a Numeric Vector |
| get_mu_vec | Calculate Exponential of Linear Combinations |
| getr | Calculate Time-Varying Reproduction Number R(t) |
| lambda | Calculate Lambda Values for Poisson Distribution Mean |
| logLikNB | Compute Log-Likelihood for a Right-Truncated Negative... |
| plot.backnow | Plot Estimates or Reproduction Numbers |
| plot.caseCounts | Plot Case Counts Over Time |
| pnb | Compute Cumulative Distribution Function for Negative... |
| prop | Calculate Proportions of Event Counts Within a Specified Time... |
| rnb | Generate Random Samples from a Negative Binomial Distribution |
| run_backnow | Run Back Calculation and Estimate Reproduction Numbers |
| sample_cases | Sample datasets |
| si | Calculate Serial Interval Distribution for COVID-19 |
