Man pages for mappeR
Construct and Visualize TDA Mapper Graphs
| assemble_mapper_object | Construct mapper graph from data |
| check_in_interval | Get a tester function for an interval. |
| compute_tightness | Compute dispersion of a single cluster |
| convert_to_clusters | "Clustering" for ballmapper just means treating each bin as... |
| create_1D_mapper_object | Run 1D mapper |
| create_ball_mapper_object | Run mapper using a trivial filter, a cover of balls, and no... |
| create_balls | Make a cover of balls |
| create_bins | Create bins of data |
| create_clusterball_mapper_object | Run clusterball mapper |
| create_mapper_object | Create a mapper object |
| create_single_bin | Create a bin of data |
| create_width_balanced_cover | Generate an overlapping cover of an interval |
| cut_dendrogram | Cut a dendrogram in context |
| eccentricity_filter | Compute eccentricity of data points |
| get_bin_vector | Recover bins |
| get_clustered_data | Get data within a cluster |
| get_clusters | Perform the clustering step in mapper |
| get_cluster_sizes | Compute cluster sizes |
| get_cluster_tightness_vector | Compute dispersion measures of a list of clusters |
| get_edgelist_from_overlaps | Obtain edge list from cluster intersections |
| get_edge_weights | Calculate edge weights |
| get_hierarchical_clusters | Perform single-linkage hierarchical clustering and process... |
| get_overlaps | Get cluster overlaps |
| get_raw_clusters | Ship data off to the clustering goblins |
| get_tallest_branch | Find the tallest branch of a dendrogram |
| hierarchical_clusterer | Create a little dude to perform hierarchical clustering in a... |
| is_in_ball | Get a tester function for a ball. |
| mapper_object_to_igraph | make igraph |
| mappeR-package | mappeR: Construct and Visualize TDA Mapper Graphs |
| next_triangular | Find which triangular number you're on |
| process_dendrograms | Cut many dendrograms in context |
| run_link | Perform agglomerative clustering on a single distance matrix. |
| subset_dists | Subset a distance matrix |
