bin | Bin values into increasingly wider bins |
cellhealth | Cell Painting dataset of CRISPR perturbations. |
cellhealthmetrics | Quality metrics for Cell Painting dataset of CRISPR... |
drop_annotation | Drop row annotations. |
get_annotation | Get row annotations. |
get_p_value | Compute p-value against null distribution |
matric | matric: Metrics for Similarity Matrices |
null_distribution | Compute null distribution for a set of metrics |
null_distribution_helper | Compute null distribution of metrics |
pipe | Pipe operator |
preprocess_data | Preprocess data. 'preprocess_data' preprocesses data. |
sim_annotate | Annotate a melted similarity matrix. |
sim_calculate | Calculate a melted similarity matrix. |
sim_calculate_ij | Calculate similarities given pairs of rows |
sim_collate | Collate several subsets of a melted similarity matrix,... |
sim_filter_all_same | Filter a melted similarity matrix to keep pairs with the same... |
sim_filter_all_same_keep_some | Filter a melted similarity matrix to keep pairs with the same... |
sim_filter_keep_or_drop_some | Filter a melted similarity matrix to remove or keep specified... |
sim_filter_some_different_drop_some | Filter a melted similarity matrix to keep pairs with the same... |
sim_metrics | Compute metrics. |
sim_metrics_helper | Helper function to compute metrics. |
sim_metrics_signif | Report p-values for metrics |
sim_new | Constructor for 'matric_sim' S3 class. |
sim_plot | Plot a melted similarity matrix. |
sim_read | Read similarity matrix. |
sim_restore | Restorer for 'matric_sim' S3 class. |
sim_validate | Validator for 'matric_sim' S3 class. |
sim_wider | Widen a symmetric melted similarity matrix. |
sim_write | Write similarity matrix. |
sparse_pairwise | Compute similarity between pairs of rows of a matrix |
sparse_similarity | Compute similarity between pairs of rows of a matrix |
tcrossprod_ij | Compute cross product between two sets of rows of a matrix. |
tidyeval | Tidy eval helpers |
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