A framework for deconvolution, alignment and postprocessing of 1-dimensional (1d) nuclear magnetic resonance (NMR) spectra, resulting in a data matrix of aligned signal integrals. The deconvolution part uses the algorithm described in Koh et al. (2009) <doi:10.1016/j.jmr.2009.09.003>. The alignment part is based on functions from the 'speaq' package, described in Beirnaert et al. (2018) <doi:10.1371/journal.pcbi.1006018> and Vu et al. (2011) <doi:10.1186/1471-2105-12-405>. A detailed description and evaluation of an early version of the package, 'MetaboDecon1D v0.2.2', can be found in Haeckl et al. (2021) <doi:10.3390/metabo11070452>.
Package details |
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| Author | Tobias Schmidt [aut, cre, cph], Martina Haeckl [aut, cph], Yanren Linda Hu [ctb], Wolfram Gronwald [aut, cph] |
| Bioconductor views | Deconvolution NMR |
| Maintainer | Tobias Schmidt <tobias.schmidt331@gmail.com> |
| License | GPL (>= 3) |
| Version | 1.6.2 |
| URL | https://github.com/spang-lab/metabodecon/ https://spang-lab.github.io/metabodecon/ |
| Package repository | View on CRAN |
| Installation |
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