Man pages for naryn
Native Access Medical Record Retriever for High Yield Analytics
| dot-create_logical_track_filter | Create a filter for logical track |
| dot-emr_expr_vars | Get a vector of variables inside an expression |
| dot-emr_filter | Parse an R filter string |
| dot-emr_vtrack.get | Get virtual track parameters given a string |
| dot-naryn | An environment for storing the package global variables |
| emr_annotate | Annotates id-time points table |
| emr_cor | Calculates correlation statistics for pairs of track... |
| emr_date2time | Converts date and hour to internal time format |
| emr_db.connect | Initializes connection with Naryn Database |
| emr_db.reload | Reloads database |
| emr_db.subset | Defines an ids subset |
| emr_db.subset.ids | Returns the ids that constitute the current ids subset |
| emr_db.subset.info | Returns information about the current subset |
| emr_db.unload | Unload all tracks from naryn database |
| emr_dist | Calculates distribution of track expressions |
| emr_download_example_data | Download example database |
| emr_entries.get | Get an entry |
| emr_entries.get_all | Get all entries |
| emr_entries.ls | List entries |
| emr_entries.reload | Reload entries from disk |
| emr_entries.rm | Remove an entry |
| emr_entries.rm_all | Remove all entries |
| emr_entries.set | Set an entry |
| emr_extract | Returns evaluated track expression |
| emr_filter.attr.src | Get or set attributes of a named filter |
| emr_filter.clear | Clear all filters from the current environment |
| emr_filter.create | Creates a new named filter |
| emr_filter.create_from_name | Create a filter from an automatically generated name |
| emr_filter.exists | Checks whether the named filter exists |
| emr_filter.info | Returns the definition of a named filter |
| emr_filter.ls | Returns a list of named filters |
| emr_filter.name | Generate a default name for a naryn filter |
| emr_filter.rm | Deletes a named filter |
| emr_filters.info | Returns the filter definition of named filters given a filter... |
| emr_ids_coverage | Returns ids coverage per track |
| emr_ids_vals_coverage | Returns ids coverage per value track |
| emr_monthly_iterator | Create an iterator that goes every year/month |
| emr_quantiles | Calculates quantiles of a track expression |
| emr_screen | Finds Id-Time points that match track expression |
| emr_summary | Calculates summary statistics of track expression |
| emr_time | Convert time periods to internal time format |
| emr_time2char | Convert time to character format |
| emr_time2date | Convert from internal time to year, month, day, hour |
| emr_time2dayofmonth | Converts time from internal format to a day of month |
| emr_time2hour | Converts time from internal format to an hour |
| emr_time2month | Converts time from internal format to a month |
| emr_time2posix | Convert EMR time to POSIXct |
| emr_time2year | Converts time from internal format to a year |
| emr_track.addto | Adds new records to a track |
| emr_track.attr.export | Returns attributes values of tracks |
| emr_track.attr.get | Returns the value of the track attribute |
| emr_track.attr.rm | Deletes a track attribute |
| emr_track.attr.set | Assigns a value to the track attribute |
| emr_track.create | Creates a track from a track expression |
| emr_track.dbs | Returns a vector of db ids which have a version of the track |
| emr_track.exists | Checks whether the track exists |
| emr_track.ids | Returns track ids |
| emr_track.import | Imports a track from a file or data-frame |
| emr_track.info | Returns information about the track. |
| emr_track.logical.create | Creates a logical track |
| emr_track.logical.exists | Is a track logical |
| emr_track.logical.info | Returns information about a logical track |
| emr_track.logical.rm | Deletes a logical track |
| emr_track.ls | Returns a list of track names |
| emr_track.mv | Moves (renames) a track |
| emr_track.percentile | Returns track percentile of the values |
| emr_track.readonly | Gets or sets "read-only" property of a track |
| emr_track.rm | Deletes a track |
| emr_track.unique | Returns track values |
| emr_track.var.get | Returns value of a track variable |
| emr_track.var.ls | Returns a list of track variables for a track |
| emr_track.var.rm | Deletes a track variable |
| emr_track.var.set | Assigns value to a track variable |
| emr_vtrack.attr.src | Get or set attributes of a virtual track |
| emr_vtrack.clear | Clear all virtual tracks from the current environment |
| emr_vtrack.create | Creates a new virtual track |
| emr_vtrack.create_from_name | Create a virtual track from an automatically generated name |
| emr_vtrack.exists | Checks whether the virtual track exists |
| emr_vtrack.info | Returns the definition of a virtual track |
| emr_vtrack.ls | Returns a list of virtual track names |
| emr_vtrack.name | Generate a default name for a virtual track |
| emr_vtrack.rm | Deletes a virtual track |
| naryn-package | Toolkit for medical records data analysis |
| pipe | Pipe operator |
| string_to_var | Create a syntactically valid variable name from a string |
| var_to_string | Decode a variable created by string_to_var |
