neuroimaGene: Transcriptomic Atlas of Neuroimaging Derived Phenotypes

Contains functions to query and visualize the Neuroimaging features associated with genetically regulated gene expression (GReX). The primary utility, neuroimaGene(), relies on a list of user-defined genes and returns a table of neuroimaging features (NIDPs) associated with each gene. This resource is designed to assist in the interpretation of genome-wide and transcriptome-wide association studies that evaluate brain related traits. Bledsoe (2024) <doi:10.1016/j.ajhg.2024.06.002>. In addition there are several visualization functions that generate summary plots and 2-dimensional visualizations of regional brain measures. Mowinckel (2020).

Getting started

Package details

AuthorXavier Bledsoe [aut, cre] (<https://orcid.org/0000-0002-6091-9372>), Eric Gamazon [aut] (<https://orcid.org/0000-0003-4204-8734>)
MaintainerXavier Bledsoe <xavier.bledsoe@vanderbilt.edu>
LicenseGPL (>= 3)
Version0.1.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("neuroimaGene")

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neuroimaGene documentation built on Sept. 20, 2024, 5:06 p.m.