pmparser: Create and Maintain a Relational Database of Data from PubMed/MEDLINE

Provides a simple interface for extracting various elements from the publicly available PubMed XML files, incorporating PubMed's regular updates, and combining the data with the NIH Open Citation Collection. See Schoenbachler and Hughey (2021) <doi:10.7717/peerj.11071>.

Package details

AuthorJake Hughey [aut, cre], Josh Schoenbachler [aut], Elliot Outland [aut]
MaintainerJake Hughey <jakejhughey@gmail.com>
LicenseGPL-2
Version1.0.21
URL https://pmparser.hugheylab.org https://github.com/hugheylab/pmparser
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("pmparser")

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pmparser documentation built on April 4, 2025, 4:55 a.m.