poolABC: Approximate Bayesian Computation with Pooled Sequencing Data

Provides functions to simulate Pool-seq data under models of demographic formation and to import Pool-seq data from real populations. Implements two ABC algorithms for performing parameter estimation and model selection using Pool-seq data. Cross-validation can also be performed to assess the accuracy of ABC estimates and model choice. Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.

Package details

AuthorJoão Carvalho [aut, cre, cph] (<https://orcid.org/0000-0002-1728-0075>), Vítor Sousa [aut]
MaintainerJoão Carvalho <jgcarvalho@fc.ul.pt>
LicenseGPL (>= 3)
Version1.0.0
URL https://github.com/joao-mcarvalho/poolABC
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("poolABC")

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poolABC documentation built on Aug. 8, 2023, 5:14 p.m.