API for poolHelper
Simulates Pooled Sequencing Genetic Data

Global functions
ExpHet_site Man page Source code
Expected_Het Man page Source code
GetGenotypes Man page Source code
Ifreqs Man page Source code
Pfreqs Man page Source code
calculatePi Man page Source code
computeReference Man page Source code
errorHet Man page Source code
filterMinor Man page Source code
filterPool Man page Source code
findMinor Man page Source code
forcePool Man page Source code
getNumReadsR_vector Man page Source code
hap2geno Man page Source code
haplo.fix Man page Source code
indProbs Man page Source code
indReads Man page Source code
maeFreqs Man page Source code
maeHet Man page Source code
maePool Man page Source code
mymae Man page Source code
numberReference Man page Source code
numberReferencePop Man page Source code
pool2sync Man page Source code
pool2vcf Man page Source code
poolPops Man page Source code
poolProbs Man page Source code
poolReads Man page Source code
popReads Man page Source code
popsReads Man page Source code
removeSites Man page Source code
remove_by_reads Man page Source code
remove_by_reads_matrix Man page Source code
run_scrm Man page Source code
simPoolseq Man page Source code
simReads Man page Source code
simulateCoverage Man page Source code
splitMatrix Man page Source code
strg2sync Man page Source code
strg2vcf Man page Source code
vcfinfo Man page Source code
vcfloci Man page Source code
vcflocus Man page Source code
poolHelper documentation built on July 9, 2023, 6:23 p.m.