Man pages for prioGene
Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information
| deal_net | Title deal with network |
| dise_gene | a vector of disease related genes |
| edge_weight | weights of edges of a net |
| genes_mat | a one-to-many matrix of GO term and gene |
| get_edge_weight | Title weight edge |
| get_gene_mat | Get a one-to-many matrix of gene and GO term |
| get_neighbor | Title get neighbor of a node |
| get_net_disease_term | Title Get the GO terms for each pair of nodes in the network |
| get_node_weight | Title weight node |
| get_Q | Title get the disease risk transition probability matrix |
| get_R | Title get the final genetic disease risk scores |
| get_R_0 | Title get the vector of initial disease risk scores for all... |
| get_term_mat | Get a one-to-many matrix of GO term and gene |
| get_W | Title |
| metabolic_net | a matrix, Human metabolic network |
| net | a network of genes |
| net_disease | a network of disease related genes |
| net_disease_term | GO terms for each pair of nodes in the network |
| node_weight | a matrix, genes and their weights |
| R_0 | the vector of initial disease risk scores for all genes |
| terms_mat | a matrix, GO terms and GO genes |
