profrep: Profile Repeatability

Calculates profile repeatability for replicate stress response curves, or similar time-series data. Profile repeatability is an individual repeatability metric that uses the variances at each timepoint, the maximum variance, the number of crossings (lines that cross over each other), and the number of replicates to compute the repeatability score. For more information see Reed et al. (2019) <doi:10.1016/j.ygcen.2018.09.015>.

Package details

AuthorUrsula K. Beattie [cre, aut, cph] (<https://orcid.org/0000-0002-7131-3712>), David Harris [aut, cph], L. Michael Romero [aut, cph] (<https://orcid.org/0000-0002-8854-8884>), J. Michael Reed [aut, cph] (<https://orcid.org/0000-0002-3571-2652>), Zachary R. Weaver [aut, cph] (<https://orcid.org/0000-0001-6314-0690>)
MaintainerUrsula K. Beattie <ursula.beattie@tufts.edu>
LicenseMIT + file LICENSE
Version1.0.0
URL https://ubeattie.github.io/profrep/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("profrep")

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profrep documentation built on May 29, 2024, 6:25 a.m.