API for rTCRBCRr
Repertoire Analysis of the Detected Clonotype
| Global functions | |
|---|---|
| all_sample_IGH_chain_all_metrics_wide_format_dataframe | Man page |
| all_sample_IGH_chain_all_metrics_wide_format_dataframe_list | Man page |
| all_sample_IGH_chain_individual_metrics_dataframe_list | Man page |
| all_sample_all_chain_all_metrics_wide_format_dataframe | Man page |
| all_sample_all_chain_all_metrics_wide_format_dataframe_list | Man page |
| all_sample_all_chain_individual_metrics_dataframe_list | Man page |
| annotate_chain_name_and_isotype_name | Man page Source code |
| calculate_IGH_isotype_proportion | Man page Source code |
| calculate_repertoire_metrics | Man page Source code |
| calibrate_proportion_by_clones | Man page Source code |
| chain_separated_dataframe | Man page |
| combine_all_sample_repertoire_metrics | Man page Source code |
| compute_repertoire_metrics_by_chain_name | Man page Source code |
| convergent_clonotype_merged_dataframe | Man page |
| format_clonotype_to_immunarch_style | Man page |
| get_item_name_x_sample_name_for_each_metric | Man page Source code |
| immunarch_style_dataframe | Man page |
| merge_convergent_clonotype | Man page Source code |
| nonproductive_CDR3aa_removed_dataframe | Man page |
| parse_mixcr | Man page Source code |
| parse_trust4 | Man page |
| rTCRBCRr | Man page |
| rTCRBCRr-package | Man page |
| raw_input_clonotype_dataframe | Man page |
| remove_nonproductive_CDR3aa | Man page Source code |
| summarize_convergence_function | Man page Source code |
| summarize_repertoire_metrics | Man page Source code |
| the global variables | Man page |
| the_divergent_clonotype_dataframe_list | Man page |
