Man pages for rbioacc
Inference and Prediction of ToxicoKinetic (TK) Models
| bioacc_metric | Biaccumulation metrics |
| Chiro_Creuzot | Data on Chironomus with several exposure routes. |
| Chironomus_benzoapyrene | Data on Chironomus exposed to benzoapyrene |
| corrMatrix | Correlations between parameters: colored matrix |
| corrPlot | Correlations between parameters: pairs plot |
| df_PP | Data frame of Posterior over Prior |
| dot-fonte | A simple implementation of to pivot_longer of tidyr |
| dot-index_col_exposure | Return column matching "expw", "exps", "expf", "exppw" of a... |
| dot-index_col_metabolite | Return column matching "concX" of a 'data.frame' where X is... |
| dot-is_equal_rmInf | Check if two vectors 'x' and 'y' are equal after remove 'Inf' |
| equations | Equations of the mathematical model used for the fit |
| exposure_names | Retrieve exposure routes names from object |
| Exposure_Sialis_lutaria | Data on Sialis lutaria exposure time series |
| fitTK | Posterior predictive check |
| Gammarus_azoxistrobine_1d_Rosch2017 | Data on Gammarus exposed to azoxistrobine |
| Internal_Sialis_lutaria | Data on Sialis lutaria internal time series |
| Male_Gammarus_Merged | Male 'Gammarus fossarum' exposed to Hg spiked water. Three... |
| Male_Gammarus_seanine_growth | Male 'Gammarus pulex' exposed to seanine spiked water. A... |
| Male_Gammarus_Single | Bio-accumulation data set for _Gammarus fossarum_ exposed to... |
| mcmcTraces | Traces of MCMC iterations |
| modelData | Create a list giving data and parameters to use in the model... |
| modelData_ode | Create a list giving data and parameters to use in the model... |
| Oncorhynchus_two | Data on Oncorhynchus exposition |
| plot.bioaccMetric | Plot function for object of class 'bioaccMetric' |
| plot_exposure | Plot exposure profile |
| plot.fitTK | Plotting method for 'fitTK' objects |
| plot_PP | Plot Posterior over Prior |
| plot_predict | Plotting method for 'predictTK' objects |
| ppc | PPC data.frame |
| predict | Prediction function using 'fitTK' object |
| psrf | Potential Scale Reduction Factors (PSRF) of the parameters |
| quantile_table | Quantiles of parameters |
| rbioacc-package | The 'rbioacc' package. |
| replace_ | Replace element of a vector |
| t95 | Return the time at 95% depuration of the parent component |
| waic | Widely Applicable Information Criterion (WAIC) |
