Man pages for rcprd
Extraction and Management of Clinical Practice Research Datalink Data
| add_to_database | Adds a single .txt file to an SQLite database on the hard... |
| combine_query | Combine a database query with a cohort. |
| combine_query.aurum | Combine a CPRD aurum database query with a cohort. |
| combine_query_boolean | Combine a database query with a cohort returning a 0/1 vector... |
| combine_query_boolean.aurum | Combine a CPRD aurum database query with a cohort returning a... |
| connect_database | Open connection to SQLite database |
| cprd_extract | Adds all the .txt files in a directory, with certain file... |
| create_directory_system | Create the appropriate directory system to be able to run... |
| db_query | Query an RSQLite database. |
| delete_directory_system | Deletes directory system created by 'delete_directory_system' |
| extract_bmi | Extract most recent BMI score relative to an index date. |
| extract_cholhdl_ratio | Extract most recent total cholesterol/high-density... |
| extract_cohort | Create cohort from patient files |
| extract_diabetes | Extract diabetes status prior to an index date. |
| extract_ho | Extract a 'history of' type variable |
| extract_smoking | Extract smoking status prior to index date. |
| extract_test_data | Extract test data. |
| extract_test_data_var | Extract standard deviation of all test data values over a... |
| extract_test_recent | Extract test data. |
| extract_time_until | Extract a 'time until' type variable |
| extract_txt_char | Read in txt file with all colClasses = "character" |
| extract_txt_cons | Read in raw .txt consultation file |
| extract_txt_death | Read in raw ONS death data file |
| extract_txt_drug | Read in raw .txt drugissue file |
| extract_txt_hes_primary | Read in raw HES primary diagnoses file |
| extract_txt_linkage | Read in linkage eligibility file |
| extract_txt_obs | Read in raw .txt observation file |
| extract_txt_pat | Read in raw .txt patient file |
| extract_txt_prob | Read in raw .txt problem file |
| extract_txt_ref | Read in raw .txt referral file |
| implement_output | Internal function to implement saving extracted variable to... |
| rcprd-package | rcprd: Extraction and Management of Clinical Practice... |
