as_ranked | Convert a tree to ranked tree |
common_tips | Find shared tip labels |
keep_tips | Prune a tree |
random_tree | Create a random ranked phylogeny |
rankedPhylo | Create a ranked tree |
read_newick | Read a newick tree |
rmv | Remove values from a vector |
rnni | Calculate RNNI distance |
rrnni-package | rrnni: Calculate a distance and a path in RNNI space |
sort_tips | Sort tip labels |
tips | Extract tips from tree |
validate_rankedPhylo | Validate rankedPhylo class |
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