Files in rtestim
Estimate the Effective Reproductive Number with Trend Filtering
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R
R/interpolate_mat.R
R/import-standalone-purrr.R
R/methods.R
R/estimate_rt.R
R/methods-cv.R
R/data.R
R/interpolate_rt.R
R/interpolate_lambda.R
R/find_knots.R
R/rtestim-package.R
R/delay_calculator.R
R/discretize_gamma.R
R/utils-enlist.R
R/cv_estimate_rt.R
R/fast_convolve.R
R/period.R
R/confband.R
src/RcppExports.cpp
src/admm.cpp
src/rtestim_path.cpp
src/wtvdz.cpp
src/utils.cpp
src/utils.h
src/dptf.h
src/admm.h
src/tvdz.cpp
inst/include/rtestim_RcppExports.h
inst/include/rtestim.h
inst/doc/delay-distributions.html
inst/doc/delay-distributions.R
inst/doc/rtestim.html
inst/doc/rtestim.R
inst/doc/rtestim.Rmd
inst/doc/delay-distributions.Rmd
inst/logo/logo.R
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-fast_convolve.R
tests/testthat/test-gcd.R
tests/testthat/test-delay_calculator.R
tests/testthat/test-estimate_rt.R
tests/testthat/test-interpolate_lambda.R
tests/testthat/test-dmat.R
tests/testthat/test-interpolate_mat.R
tests/testthat/test-cv.R
tests/testthat/test-period.R
tests/testthat/test-fitted.R
tests/testthat/test-create_lambda.R
vignettes/backer.csv
vignettes/duotang-counts.rds
vignettes/xu-etal-DATA_RAW.xlsx
vignettes/delay-distns-byvar.rds
vignettes/rtestim.Rmd
vignettes/delay-distributions.Rmd
data/cancovid.rda
man/predict.cv_poisson_rt.Rd
man/configure_rt_admm.Rd
man/cancovid.Rd
man/fitted.cv_poisson_rt.Rd
man/plot.rt_confidence_band.Rd
man/estimate_rt.Rd
man/predict.poisson_rt.Rd
man/cv_estimate_rt.Rd
man/confband.Rd
man/plot.poisson_rt.Rd
man/interpolate_rt.Rd
man/plot.cv_poisson_rt.Rd
man/delay_calculator.Rd
man/discretize_gamma.Rd
man/figures/README-cv-estimate-1.png
man/figures/README-full-fit-1.png
man/figures/logo.png
man/figures/README-plot-data-1.png
