Files in shinyExprPortal
A Configurable 'shiny' Portal for Sharing Analysis of Molecular Expression Data

MD5
NEWS.md README.md
NAMESPACE
DESCRIPTION
LICENSE
R/mod_degModules.R R/utils_compute.R R/mod_degModules_config.R R/mod_singleGeneCorr_config.R R/create_config.R R/mod_degSummary_utils.R R/mod_corrModules.R R/mod_geneProjectionOverlay_config.R R/mod_degSummary_config.R R/mod_compareTrajGroups_utils.R R/mod_multiMeasureCorr.R R/mod_compareTrajGroups.R R/mod_geneProjectionOverlay.R R/mod_multiMeasureCorr_utils.R R/mod_degDetails.R R/mod_multiMeasureCorr_config.R R/mod_degDetails_utils.R R/utils_vegaplots.R R/mod_geneModulesHeatmap_utils.R R/mod_cohortOverview.R R/app_server.R R/app_config.R R/mod_geneModulesHeatmap.R R/mod_degSummary.R R/utils_select.R R/parse_config.R R/create_example.R R/mod_singleMeasureCorr.R R/utils_inputs.R R/mod_geneModulesHeatmap_config.R R/utils_outputs.R R/mod_singleGeneCorr.R R/utils_filter.R R/mod_compareTrajGroups_config.R R/mod_degDetails_config.R R/utils_updates.R R/golem_utils_ui.R R/mod_corrModules_config.R R/create_mod_template.R R/app_ui.R R/mod_singleMeasureCorr_config.R R/mod_cohortOverview_config.R R/mod_cohortOverview_utils.R R/golem_utils_server.R R/golem_funcs.R R/mod_geneProjectionOverlay_utils.R R/run_app.R
inst/app-config.yml
inst/doc/shinyExprPortal.html
inst/doc/shinyExprPortal.R inst/doc/config.R
inst/doc/customization.html
inst/doc/config.html
inst/doc/dataprep.R
inst/doc/dataprep.html
inst/doc/dataprep.Rmd inst/doc/customization.Rmd inst/doc/customization.R inst/doc/config.Rmd inst/doc/shinyExprPortal.Rmd
inst/app/d3.min.js
inst/app/www/degSummary.png
inst/app/www/style.css
inst/app/www/cohortOverview.png
inst/app/www/compareTrajGroups.png
inst/app/www/favicon_.ico
inst/app/www/singleGeneCorr.png
inst/app/build/d3-legend.js
inst/app/build/cohort_overview.css
inst/app/build/cohort_overview.js
inst/helpfiles/degDetails-volcano.png
inst/helpfiles/cohortOverview-options.png
inst/helpfiles/compareTrajGroups-sel.png
inst/helpfiles/multiMeasureCorr-adv.png
inst/helpfiles/singleGeneCorr-tabs.png
inst/helpfiles/multiMeasureCorr.md
inst/helpfiles/geneProjectionOverlay-options.png
inst/helpfiles/singleMeasureCorr-table.png
inst/helpfiles/degDetails-sel.png
inst/helpfiles/geneProjectionOverlay-subset.png
inst/helpfiles/geneModulesHeatmap.md
inst/helpfiles/singleMeasureCorr-subset.png
inst/helpfiles/degDetails-table.png
inst/helpfiles/singleGeneCorr.md inst/helpfiles/geneProjectionOverlay.md
inst/helpfiles/singleMeasureCorr-adv.png
inst/helpfiles/singleGeneCorr-subset.png
inst/helpfiles/cohortOverview-plot.png
inst/helpfiles/singleGeneCorr-adv.png
inst/helpfiles/singleMeasureCorr.md
inst/helpfiles/multiMeasureCorr-subset.png
inst/helpfiles/multiMeasureCorr-options.png
inst/helpfiles/multiMeasureCorr-table.png
inst/helpfiles/compareTrajGroups-plot.png
inst/helpfiles/compareTrajGroups.md
inst/helpfiles/degDetails-options.png
inst/helpfiles/geneModulesHeatmap-mod.png
inst/helpfiles/geneModulesHeatmap-sel.png
inst/helpfiles/geneProjectionOverlay-plot.png
inst/helpfiles/cohortOverview.md inst/helpfiles/degDetails.md
build/vignette.rds
tests/testthat.R tests/testthat/test-utils_select.R tests/testthat/test-utils_vegaplots.R tests/testthat/test-mod_compareTrajGroups_utils.R tests/testthat/test-mod_geneProjectionOverlay_utils.R tests/testthat/test-utils_updates.R tests/testthat/test-utils_inputs.R tests/testthat/test-mod_multiMeasureCorr_utils.R tests/testthat/test-mod_geneModulesHeatmap_utils.R tests/testthat/test-utils_filter.R tests/testthat/test-mod_degDetails_utils.R tests/testthat/test-mod_cohortOverview_utils.R tests/testthat/test-mod_degSummary_utils.R tests/testthat/test-utils_compute.R tests/testthat/helper-workflow.R
vignettes/singlemeasure.png
vignettes/modulesheatmap.png
vignettes/comparetraj.png
vignettes/volcanoplot.png
vignettes/dataprep.Rmd
vignettes/multimeasure.png
vignettes/customization.Rmd
vignettes/cohortoverview.png
vignettes/samplecat-example.png
vignettes/projectionoverlay.png
vignettes/config.Rmd vignettes/shinyExprPortal.Rmd
vignettes/singlegenecorr.png
man/run_app.Rd man/show_available_modules.Rd man/create_config_template.Rd man/create_example.Rd man/create_config_wizard.Rd man/create_module_template.Rd
man/figures/example2.png
man/figures/example.png
shinyExprPortal documentation built on Sept. 11, 2024, 6:13 p.m.