Files in spectre
Predict Regional Community Composition
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/generate_commonness_matrix_from_gdm.R
R/plot_error.R
R/print.optim_sol.R
R/data.R
R/run_optimization_min_conf.R
R/catch-routine-registration.R
R/calc_commonness_error.R
R/onUnload.R
R/plot_commonness.R
R/spectre-package.R
src/test-runner.cpp
src/RcppExports.cpp
src/optimizer.h
src/test-minconf.cpp
src/optimizer.cpp
src/test-minconf.h
src/minconf.cpp
src/minconf.h
inst/CITATION
inst/doc/minimal_example.R
inst/doc/minimal_example.Rmd
inst/doc/minimal_example.html
inst/doc/getting_started_with_spectre.html
inst/doc/getting_started_with_spectre.Rmd
inst/doc/getting_started_with_spectre.R
build/vignette.rds
tests/testthat.R
tests/testthat/test-calc_commonness_error.R
tests/testthat/test-min_conf_errors.R
tests/testthat/test-fixed_species.R
tests/testthat/test-cpp.R
tests/testthat/test-plot_commonness.R
tests/testthat/test-run_optimization_min_conf.R
tests/testthat/test-plot_error.R
tests/testthat/test-generate_commonness_matrix_from_gdm.R
tests/benchmark/benchmark-minconf.cpp
tests/benchmark/catch.hpp
vignettes/minimal_example.Rmd
vignettes/getting_started_with_spectre.Rmd
data/target_matrix.rda
data/estimated_gamma.rda
data/minimal_example_data.rda
data/alpha_list.rda
man/calc_commonness_error.Rd
man/target_matrix.Rd
man/print.optim_sol.Rd
man/generate_commonness_matrix_from_gdm.Rd
man/minimal_example_data.Rd
man/run_optimization_min_conf.Rd
man/plot_commonness.Rd
man/spectre.Rd
man/estimated_gamma.Rd
man/plot_error.Rd
man/alpha_list.Rd
man/figures/spectre.png
