Man pages for superspreading
Understand Individual-Level Variation in Infectious Disease Transmission
| calc_network_R | Calculate the reproduction number (R) for a (heterogeneous)... |
| constants | Constants used in 'superspreading' |
| dot-chain_sim | Simulate transmission chains using a stochastic branching... |
| dot-fit | Optimise a function using either numerical optimisation or... |
| dpoislnorm | Density of the poisson-lognormal compound distribution |
| dpoisweibull | Density of the poisson-Weibull compound distribution |
| gamma | Defines the gamma functions in terms of the mean reproductive... |
| ic_tbl | Helper function to create a model comparison table |
| lseq | Generates a log scaled sequence of real numbers |
| ppoislnorm | Cumulative distribution function of the poisson-lognormal... |
| ppoisweibull | Cumulative distribution function of the poisson-Weibull... |
| probability_contain | Probability that an outbreak will be contained |
| probability_epidemic | Calculate the probability a disease will cause an outbreak... |
| probability_extinct | Calculate the probability a branching process will go extinct... |
| proportion_cluster_size | Estimate what proportion of new cases originated within a... |
| proportion_transmission | Estimate what proportion of cases cause a certain proportion... |
| superspreading-package | superspreading: Understand Individual-Level Variation in... |
