tAI: The tRNA Adaptation Index

Functions and example files to calculate the tRNA adaptation index, a measure of the level of co-adaptation between the set of tRNA genes and the codon usage bias of protein-coding genes in a given genome. The methodology is described in dos Reis, Wernisch and Savva (2003) <doi:10.1093/nar/gkg897>, and dos Reis, Savva and Wernisch (2004) <doi:10.1093/nar/gkh834>.

Getting started

Package details

AuthorMario dos Reis [aut, cre]
MaintainerMario dos Reis <mariodosreis@gmail.com>
LicenseGPL (>= 2)
Version0.2.2
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("tAI")

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tAI documentation built on April 16, 2025, 5:11 p.m.