Files in tepr
Transcription Elongation Profiling
MD5
NEWS
NAMESPACE
DESCRIPTION
R/meandifference.R
R/plotmetagenes.R
R/universegroup.R
R/preprocessing.R
R/countna.R
R/attenuation.R
R/genesECDF.R
R/plotecdf.R
R/plotauc.R
R/tepr.R
R/plotmulti.R
R/preprocessing-retrieveanno.R
R/preprocessing-createtablescores.R
R/allauc.R
R/plothistoknee.R
R/kneeid.R
R/averageandfilterexprs.R
R/preprocessing-makewindows.R
R/preprocessing-blacklisthighmap-utils.R
R/utils.R
R/preprocessing-blacklisthighmap.R
inst/doc/tepr.R
inst/doc/tepr.Rmd
inst/doc/tepr.html
inst/extdata/AUCcompare_pval.png
inst/extdata/cugusi_6.tsv
inst/extdata/finaltab-chr13.tsv
inst/extdata/meandiff.rds
inst/extdata/metagene_attenuation.png
inst/extdata/attenuation.rds
inst/extdata/exptab-preprocessing.csv
inst/extdata/kneeid.rds
inst/extdata/AUCcompare_group.png
inst/extdata/histo_percent.png
inst/extdata/allauc.rds
inst/extdata/ctrl_rep1_chr13.forward.bg
inst/extdata/countna.rds
inst/extdata/finaltab.rds
inst/extdata/structure.png
inst/extdata/allwindowsbed.rds
inst/extdata/ctrl_rep1_chr13.reverse.bg
inst/extdata/tepr.rds
inst/extdata/exptab.csv
inst/extdata/genesecdf.rds
inst/extdata/histo_kb.png
inst/extdata/universegroup.rds
inst/extdata/averageandfilterexprs.rds
inst/extdata/k50.umap.chr13.hg38.0.8.bed
inst/extdata/EGFR.png
inst/extdata/gencode-chr13.gtf
inst/extdata/hg38-blacklist-chr13.v2.bed
inst/extdata/allannobed.rds
build/vignette.rds
tests/testthat.R
tests/testthat/test-kneeid.R
tests/testthat/test-preprocessing-blacklisthighmap.R
tests/testthat/test-countna.R
tests/testthat/test-preprocessing-createtablescores.R
tests/testthat/test-universegroup.R
tests/testthat/test-attenuation.R
tests/testthat/test-tepr.R
tests/testthat/test-genesECDF.R
tests/testthat/test-preprocessing-makewindows.R
tests/testthat/test-meandifference.R
tests/testthat/test-allauc.R
tests/testthat/test-preprocessing.R
tests/testthat/test-preprocessing-retrieveanno.R
tests/testthat/test-averageandfilterexprs.R
vignettes/tepr.Rmd
man/retrieveanno.Rd
man/attenuation.Rd
man/plotecdf.Rd
man/universegroup.Rd
man/tepr.Rd
man/makewindows.Rd
man/plotmetagenes.Rd
man/genesECDF.Rd
man/allauc.Rd
man/blacklisthighmap.Rd
man/kneeid.Rd
man/meandifference.Rd
man/plotauc.Rd
man/countna.Rd
man/teprmulti.Rd
man/averageandfilterexprs.Rd
man/plothistoknee.Rd
man/createtablescores.Rd
man/checkexptab.Rd
man/preprocessing.Rd
man/showallcomp.Rd
man/kneeallconds.Rd
man/plotmulti.Rd
