API for whirl
Log Execution of Scripts

Global functions
bco_create_inputs Source code
bco_create_outputs Source code
bco_file_format Source code
check_approved Source code
create_biocompute Source code
create_description_domain Source code
create_execution_domain Source code
create_io_domain Source code
create_parametrics_domain Source code
custom_logging Man page
enrich_input Source code
get_file_ext Source code
get_single_unique Source code
get_status Source code
get_unique_values Source code
internal_run Source code
knit_print_whirl_renv_status Source code
knit_print_whirl_summary_info Source code
log_delete Man page Source code
log_df Source code
log_read Man page Source code
log_write Man page Source code
mdformats Source code
normalize_with_base Source code
package_spec Source code
path_rel Source code
print.whirl_renv_status Source code
python_version Source code
quarto_callout Source code
r_secrets Source code
read_environment Source code
read_from_log Source code
read_glob Source code
read_info Source code
read_options Source code
read_python Source code
read_session_info Source code
read_strace Source code
read_strace_info Source code
refine_strace Source code
render_summary Source code
renv_message_headers Source code
renv_message_table Source code
renv_status Source code
replace_na_with_last Source code
run Man page Source code
run_current_script Source code
scale_to_percent Source code
split_log Source code
start_strace Source code
use_biocompute Man page Source code
use_template Source code
use_whirl Man page Source code
util_queue_summary Source code
whirl Man page
whirl-options Man page
whirl-options-params Man page
whirl-package Man page
wq_add_queue Source code
wq_initialise Source code
wq_next_step Source code
wq_poll Source code
wq_push Source code
wq_run Source code
wq_skip Source code
wq_wait Source code
write_biocompute Man page Source code
write_to_log Source code
wrs_check_status Source code
wrs_create_log Source code
wrs_create_logs Source code
wrs_create_outputs Source code
wrs_finalize Source code
wrs_initialize Source code
wrs_log_finish Source code
wrs_log_script Source code
wrs_pb_done Source code
wrs_pb_update Source code
wrs_poll Source code
wrs_print Source code
wrs_wait Source code
whirl documentation built on Aug. 8, 2025, 7:22 p.m.