API for AlexanderKononov/cytofBrowser
Detail analysis and visualisation CyTOF data
| Global functions | |
|---|---|
| abundence_meter | Man page Source code |
| add_cluster_GDB | Man page Source code |
| add_marker_GDB | Man page Source code |
| add_observation_GDB | Man page Source code |
| add_phenounite_GDB | Man page Source code |
| add_populatio_GDB | Man page Source code |
| add_sample_GDB | Man page Source code |
| add_signals_between_clusters_GDB | Man page Source code |
| add_signals_in_cluster_GDB | Man page Source code |
| asinh_transformation | Man page Source code |
| backgraund_correlation | Man page Source code |
| background_anova | Man page Source code |
| cell_filter | Man page Source code |
| cell_type_organiser | Man page Source code |
| cluster_merging | Man page Source code |
| cluster_unification | Man page Source code |
| comparator_mk | Man page Source code |
| ct_sample_aggregator | Man page Source code |
| cytofBrowserGUI | Man page Source code |
| cytofBrowser_server | Man page Source code |
| filter_edges | Man page Source code |
| filter_mk | Man page Source code |
| get_UMAP_dataframe | Man page Source code |
| get_abund_cross_panel | Man page Source code |
| get_abundance | Man page Source code |
| get_abundance_correlation | Man page Source code |
| get_abundance_dataframe | Man page Source code |
| get_add_cell_annotation_from_data | Man page Source code |
| get_adj_corr_pValue_matrix | Man page Source code |
| get_anova_mk | Man page Source code |
| get_bg_anova_land_mk | Man page Source code |
| get_bg_corr_land_mk | Man page Source code |
| get_bg_naive_corr_land_mk | Man page Source code |
| get_cell_annotation_fcs_files | Man page Source code |
| get_cell_clustering_vector | Man page Source code |
| get_cell_number | Man page Source code |
| get_cell_type_from_gates | Man page Source code |
| get_cluster_annotation | Man page Source code |
| get_clustered_fcs_files | Man page Source code |
| get_clustering_exp_cell_f_cross_panel | Man page Source code |
| get_common_markers | Man page Source code |
| get_consensusClust | Man page Source code |
| get_contrast_corr_land_mk | Man page Source code |
| get_contrast_naive_corr_land_mk | Man page Source code |
| get_corr_coef_matrix | Man page Source code |
| get_corr_pValue_matrix | Man page Source code |
| get_data_for_gating | Man page Source code |
| get_deconvol_dataframe | Man page Source code |
| get_edges | Man page Source code |
| get_entire_panel | Man page Source code |
| get_euclid_dist | Man page Source code |
| get_fcs_cell_clustering_vector | Man page Source code |
| get_fcs_cluster_annotation | Man page Source code |
| get_fcs_metadata | Man page Source code |
| get_fcs_panel | Man page Source code |
| get_fcs_raw | Man page Source code |
| get_inds_subset | Man page Source code |
| get_list_cell_ctDist | Man page Source code |
| get_list_expData | Man page Source code |
| get_matrices_corr_info | Man page Source code |
| get_mk_clust_heatmap_dataframe | Man page Source code |
| get_mk_exp_data_cross_p | Source code |
| get_neo_api | Man page Source code |
| get_nodes | Man page Source code |
| get_optimal_clusters | Man page Source code |
| get_panel_content | Man page Source code |
| get_signal_between_cluster_mk | Man page Source code |
| get_signal_in_cluster_mk | Man page Source code |
| get_signals_between_clusters | Man page Source code |
| get_signals_between_clusters_top | Man page Source code |
| get_signals_in_cluster | Man page Source code |
| get_signals_in_cluster_top | Man page Source code |
| get_som | Man page Source code |
| get_test_fcs_metadata | Man page Source code |
| get_threshold_exp_cell_f_cross_panel | Man page Source code |
| get_use_marker | Man page Source code |
| get_write_corr_info_cross_p | Man page Source code |
| htest_data_extractor | Man page Source code |
| htest_data_extractor_mk | Man page Source code |
| neo_api_ping | Man page Source code |
| outlier_by_quantile_transformation | Man page Source code |
| scatter_plot_data_prep | Man page Source code |
| signal_extractor | Man page Source code |
| signal_filter | Man page Source code |
| take_top_correlation | Man page Source code |
| target_type_cortest | Man page Source code |
| target_type_data_extractor | Man page Source code |
| target_type_organiser | Man page Source code |
| tt_sample_aggregator | Man page Source code |
| upload_fcs_data | Source code |
