AlexandrovLab/SigProfilerMatrixGeneratorR: An R wrapper for running the SigProfilerMatrixGenerator framework

SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file). The tool seamlessly integrates with other SigProfiler tools.

Getting started

Package details

AuthorErik Bergstrom
MaintainerErik Bergstrom <ebergstr@eng.ucsd.edu>
LicenseBSD 2-Clause
Version1.2.13
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("AlexandrovLab/SigProfilerMatrixGeneratorR")
AlexandrovLab/SigProfilerMatrixGeneratorR documentation built on Jan. 25, 2023, 7:04 p.m.