Files in AlexandrovLab/SigProfilerMatrixGeneratorR
An R wrapper for running the SigProfilerMatrixGenerator framework
.Rbuildignore
.Rhistory
.Rproj.user/3B95E4F6/build_options
.Rproj.user/3B95E4F6/console06/INDEX001
.Rproj.user/3B95E4F6/cpp-definition-cache
.Rproj.user/3B95E4F6/ctx/ctx-16852/console_actions
.Rproj.user/3B95E4F6/ctx/ctx-16852/environment
.Rproj.user/3B95E4F6/ctx/ctx-16852/environment_vars
.Rproj.user/3B95E4F6/ctx/ctx-16852/history
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.Rproj.user/3B95E4F6/ctx/ctx-16852/options
.Rproj.user/3B95E4F6/ctx/ctx-16852/plots_dir/INDEX
.Rproj.user/3B95E4F6/ctx/ctx-16852/plots_dir/empty.png
.Rproj.user/3B95E4F6/ctx/ctx-16852/rversion
.Rproj.user/3B95E4F6/ctx/ctx-16852/search_path/package_paths
.Rproj.user/3B95E4F6/ctx/ctx-16852/search_path/search_path_elements
.Rproj.user/3B95E4F6/ctx/ctx-16852/settings
.Rproj.user/3B95E4F6/pcs/debug-breakpoints.pper
.Rproj.user/3B95E4F6/pcs/files-pane.pper
.Rproj.user/3B95E4F6/pcs/source-pane.pper
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.Rproj.user/3B95E4F6/pcs/workbench-pane.pper
.Rproj.user/3B95E4F6/persistent-state
.Rproj.user/3B95E4F6/rmd-outputs
.Rproj.user/3B95E4F6/saved_source_markers
.Rproj.user/3B95E4F6/sources/prop/72561E2F
.Rproj.user/3B95E4F6/sources/prop/A5674A2
.Rproj.user/3B95E4F6/sources/prop/INDEX
.Rproj.user/shared/notebooks/patch-chunk-names
.Rproj.user/shared/notebooks/paths
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/.Rapp.history
R/SigProfilerMatrixGeneratorR.R
README.md
SigProfilerMatrixGeneratorR.Rproj
man/CNVMatrixGenerator.Rd
man/SVMatrixGenerator.Rd
man/SigProfilerMatrixGeneratorR.Rd
schematic.png
test.R
test_data/CNV/Battenberg_test.tsv
test_data/SBS/BRCA_example_subs_simple.txt
test_data/SV/PD11346a.560_breast.rearrangements.n560.bedpe.tsv
test_data/SV/PD11379a.560_breast.rearrangements.n560.bedpe.tsv
