Man pages for AllenInstitute/CCN
Generate the Standardized Common Cell type Nomenclature (CCN)
| add_attr_to_dend | Add an attribute to dendrogram nodes |
| annotate_nomenclature_from_metadata | Automatic annotation of nomenclature table from metadata |
| apply_CCN | Apply CCN (**BETA**) |
| build_nomenclature_table | Build initial nomenclature table from dendrogram |
| cell_assignment_from_dendrogram | Assign cells to cell sets from dendrogram |
| cell_assignment_from_groups_of_cell_types | Assign cells to cell sets from nomenclature table |
| define_child_accessions | Label cell set children |
| define_parent_accessions | Label parent accessions |
| dend_to_list | Convert R dendrogram to a list |
| expand_cell_set_labels | Expand cell set labels |
| find_ontology_terms | Find ontology terms by querying the Ontology Lookup Service... |
| make_preferred_alias_unique | Make a unique preferred alias |
| merge_cell_set_labels | Merge cell set labels |
| overwrite_dend_node_labels | Overwrite dendrogram node labels |
| plot_dend | Plot dendrogram |
| split_column | Split a column |
| update_dendrogram_with_nomenclature | Add nomenclature annotations to dendrogram |
