Man pages for AlzbetaG/Metabol
The statistical analysis of metabolomic data
| batchSort | A toy example of metabolomic data set sorted according to... |
| bigQC | Quality control samples (QCs) checking |
| GraphsBox | Boxplots |
| GraphsBoxPvalue | Boxplots with p-values |
| GraphsClust | Cluster analysis |
| GraphsCorr | Correlation graphs |
| GraphsCorrDSC | Correlation graphs with class separation |
| GraphsOPLSDA | Orthogonal partial least squares - discriminant analysis... |
| GraphsOutlier | Outlier analysis of PCA and PLS-DA |
| GraphsPCA | Principal component analysis (PCA) |
| GraphsPCA3D | 3D principal component analysis (PCA) |
| GraphsPermut | Permutation test of PLS-DA and OPLS-DA |
| GraphsPLSDA | Partial least squares - discriminant analysis (PLS-DA) |
| GraphsROC | ROC curves |
| GraphsROCcomb | ROC curves for combination of variables |
| GraphsViol | Violin plots |
| GraphsVIP | Variable importance plots (VIP) |
| GraphsVIPOPLSDA | Orthogonal partial least squares - discriminant analysis... |
| GraphsVolcano | Logratio volcano plots |
| metabol | A toy example of metabolomic data set |
| Preproc | Data preprocessing |
| Tests | Standard tests |
| transf | Transformation |
