Files in AndrewLawrence/dCVnet

doubly cross-validated elastic-net regularised generalised linear models

R/dCVnet.R R/dCVnet_calibration.R R/dCVnet_imputation.R R/dCVnet_innerloop.R R/dCVnet_logger.R R/dCVnet_main.R R/dCVnet_nullperformance.R R/dCVnet_performance.R R/dCVnet_plotting.R R/dCVnet_referencemodels.R R/dCVnet_roc.R R/dCVnet_utilities.R R/data.R README.md data-raw/blrsim.R data-raw/breaking_cv.R data-raw/prostate.R man/InternalPerformanceSummaryFunctions.Rd man/amalgamate_cv.glmnet.Rd man/average_rocdata.Rd man/blrsim.Rd man/calibration.Rd man/casesummary.performance.Rd man/coef.dCVnet.Rd man/coef.multialpha.repeated.cv.glmnet.Rd man/coef_refunreg.Rd man/coefficients_summary.Rd man/cv.glmnet.modelsummary.Rd man/cv_performance_glm.Rd man/dCVnet-package.Rd man/dCVnet.Rd man/extract_glmnet_alpha.Rd man/extract_rocdata.Rd man/family.dCVnet.Rd man/is_multialpha.repeated.cv.glmnet.Rd man/lambda_rangefinder.Rd man/lambda_seq_list.Rd man/log_results_to_excel.Rd man/modsel_perf.Rd man/multialpha.repeated.cv.glmnet.Rd man/parse_alphalist.Rd man/parse_dCVnet_input.Rd man/parseddata_summary.Rd man/performance.Rd man/performance_with_permuted_labels.Rd man/plot.dCVnet.Rd man/plot.multialpha.repeated.cv.glmnet.Rd man/plot.rocdata.Rd man/plot_outerloop_coefs.Rd man/predict.dCVnet.Rd man/predict.multialpha.repeated.cv.glmnet.Rd man/predict_cat.glm.Rd man/prediction_error_plot.Rd man/prostate.Rd man/refunreg.Rd man/repeated.cv.glmnet.Rd man/report_performance_summary.Rd man/report_reference_performance_summary.Rd man/selected_hyperparameters.Rd man/set_glmnet_alpha.Rd man/summary.dCVnet.Rd man/summary.multialpha.repeated.cv.glmnet.Rd man/summary.performance.Rd man/tidy_coef.glmnet.Rd man/tidy_confusionmatrix.Rd man/tidy_predict.glmnet.Rd man/tidy_predict.multialpha.repeated.cv.glmnet.Rd man/tuning_plot_dCVnet.Rd man/variable_importance.Rd tests/testthat.R tests/testthat/make_testdata.R tests/testthat/test-dCVnet_classperformance.R tests/testthat/test-dCVnet_coef.R tests/testthat/test-dCVnet_imputation.R tests/testthat/test-dCVnet_modelfitting.R tests/testthat/test-dCVnet_parse_data.R vignettes/dCVnet-imputation.Rmd vignettes/dCVnet-limitations.Rmd vignettes/dCVnet-vs-glm.Rmd vignettes/merging-ROC.Rmd vignettes/prostate.Rmd