API for BBCG/ramr
Detection of Rare Aberrantly Methylated Regions in Array and NGS Data
| Global functions | |
|---|---|
| .onAttach | Source code |
| getAMR | Man page |
| getAMR.obsolete | Man page |
| getUniverse | Man page |
| plotAMR | Man page |
| ramr.data | Man page |
| ramr.samples | Man page |
| ramr.tp.nonunique | Man page |
| ramr.tp.unique | Man page |
| rcpp_compute_logp_beta | Source code |
| rcpp_compute_logp_beta_binom | Source code |
| rcpp_compute_xiqr | Source code |
| rcpp_create_granges_stranded_logp | Source code |
| rcpp_create_granges_stranded_xiqr | Source code |
| rcpp_create_granges_unstranded_logp | Source code |
| rcpp_create_granges_unstranded_xiqr | Source code |
| rcpp_extract_coef | Source code |
| rcpp_extract_out | Source code |
| rcpp_filter_threshold_logp | Source code |
| rcpp_filter_threshold_xiqr | Source code |
| rcpp_fit_beta_amle | Source code |
| rcpp_fit_beta_mom | Source code |
| rcpp_fit_binom | Source code |
| rcpp_generate_random_values | Source code |
| rcpp_get_iqr | Source code |
| rcpp_get_meanvar_ari_equal | Source code |
| rcpp_get_meanvar_ari_invDist | Source code |
| rcpp_get_meanvar_ari_logInvDist | Source code |
| rcpp_get_meanvar_ari_sqrtInvDist | Source code |
| rcpp_get_meanvar_geo_equal | Source code |
| rcpp_get_meanvar_geo_invDist | Source code |
| rcpp_get_meanvar_geo_logInvDist | Source code |
| rcpp_get_meanvar_geo_sqrtInvDist | Source code |
| rcpp_prepare_data_identity | Source code |
| rcpp_prepare_data_linear | Source code |
| rcpp_test_omp | Source code |
| simulateAMR | Man page |
| simulateData | Man page |
| simulateData.obsolete | Man page |
