Man pages for BPijuanSala/anSeq
Tools to analyse RNA-seq data
| allocateCellsForest | Allocate cells based on trained randomForest. |
| countsMatrix | Example of counts |
| findMarkers | Find markers within groups |
| findSurfaceMarkers | Find markers within groups |
| geneTable | Ensembl geneIDs - geneNames |
| getGeneID | Obtain geneIDs from geneNames |
| getGeneName | Obtain geneNames from geneIDs |
| hclustCells | Cluster cells |
| HumanSurface | Human surface markers |
| meta | Example of metadata |
| MouseSurface | Mouse surface markers |
| plotGeneLevels | Plot gene expression |
| selectCellsinPlot | Select cells from a plot |
| trainForest | Train randomForest on a dataset. |
