| callGSVA | GSVA enrichment analysis |
| callZSCORE | Row ZSCORES |
| cptSamples | Sample profile identifier analysis |
| ExpressionSet | Gene Expression (ExpressionSet) data |
| filterVars | A filter function for the data |
| freqplot | A plotting function for SISPA sample identifiers |
| SISPA | SISPA |
| sortData | Sorts the data by a column |
| VariantSet | Variant (VariantSet) data |
| waterfallplot | A plotting function for SISPA sample identifiers |
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