Files in BioCool-Lab/R-PSSM
Features Extracted from Position Specific Scoring Matrix (PSSM)
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
PSSMCOOL.Rproj
R/AATP_TPC.R
R/AA_EDP_MEDP.R
R/AAtrigrame_pssm.R
R/AB_PSSM.R
R/AC.R
R/CC.R
R/DISSULFID.R
R/DMACA-PSSM.R
R/DPC-PSSM.R
R/DP_PSSM.R
R/DWTPSSM.R
R/FPSSM.R
R/Grey_PSSM_PseAAC.R
R/MBMGAC_PSSM.R
R/PSSM400.R
R/PSSMAC.R
R/PSSM_BLOCK.R
R/RPSSM.R
R/SCSH.R
R/consunsus.R
R/cs_pssm.R
R/discrete_cosin.R
R/k_seperated.R
R/kiderafactor.R
R/lpc_pssm.R
R/pse_pssm.R
R/pssm_sd.R
R/single_average.R
R/smooted_pssm.R
R/somaPssm.R
R/svd-pssm.R
README.md
classification-code-data/Use case.R
classification-code-data/all_needed_pssms90.zip
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classification-code-data/all_needed_pssms90/Q9ULL4.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULT8.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULU4.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULU8.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULV0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULV3.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULW3.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULW5.fasta.pssm
classification-code-data/all_needed_pssms90/Q9ULX3.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UM54.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UMS0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UNE7.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UNZ2.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UPR0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UPT5.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UPW0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UPW8.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UPZ6.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UQ16.fasta.pssm
classification-code-data/all_needed_pssms90/Q9UQF2.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y2D1.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y2H0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y2J0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y2J2.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y376.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y3A3.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y3C5.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y3E7.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y3L3.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y496.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y4X5.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y561.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y5K6.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y5X1.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y613.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y6E0.fasta.pssm
classification-code-data/all_needed_pssms90/Q9Y6X6.fasta.pssm
classification-code-data/negative.csv
classification-code-data/positive.csv
inst/extdata/C7GQS7.txt.pssm
inst/extdata/C7GRQ3.txt.pssm
inst/extdata/C7GS61.txt.pssm
inst/extdata/C7GSI6.txt.pssm
inst/extdata/C7GWA2.txt.pssm
man/AATP_TPCC.Rd
man/AB_PSSM.Rd
man/Averag_Block.Rd
man/CS_PSe_PSSM.Rd
man/DFMCA_PSSM.Rd
man/DPC_PSSM.Rd
man/DP_PSSM.Rd
man/Discrete_Cosine_Transform.Rd
man/EDP_MEDP.Rd
man/FPSSM.Rd
man/FPSSM2.Rd
man/LPC_PSSM.Rd
man/MBMGACPSSM.Rd
man/PSSMAC.Rd
man/PSSMBLOCK.Rd
man/PSSMCOOL-package.Rd
man/PSSM_SD.Rd
man/SOMA_PSSM.Rd
man/SVD_PSSM.Rd
man/consunsus_sequence.Rd
man/disulfid.Rd
man/dwt_PSSM.Rd
man/grey_pssm_pseAAC.Rd
man/k_mers.Rd
man/k_seperated_bigrame.Rd
man/kiderafactor.Rd
man/pse_pssm.Rd
man/pssm400.Rd
man/pssm_ac.Rd
man/pssm_cc.Rd
man/pssm_seg.Rd
man/rpssm.Rd
man/scsh2.Rd
man/single_Average.Rd
man/smoothed_PSSM.Rd
man/three_mer.Rd
man/trigrame_pssm.Rd
tests/spelling.R
tests/testthat.R
tests/testthat/test-AATP-TPC.R
tests/testthat/test-AAtrigrame_pssm.R
tests/testthat/test-AB_PSSM.R
tests/testthat/test-AC.R
tests/testthat/test-CC.R
tests/testthat/test-DISSULFID.R
tests/testthat/test-DMACA-PSSM.R
tests/testthat/test-DPC_PSSM.R
tests/testthat/test-DP_PSSM.R
tests/testthat/test-DWTPSSM.R
tests/testthat/test-EDP_MEDP.R
tests/testthat/test-FPSSM.R
tests/testthat/test-Grey_PSSM_PseAAC.R
tests/testthat/test-MBMGAC_PSSM.R
tests/testthat/test-PSSM400.R
tests/testthat/test-PSSMAC.R
tests/testthat/test-PSSM_BLOCK.R
tests/testthat/test-RPSSM.R
tests/testthat/test-SCSH.R
tests/testthat/test-consunsus.R
tests/testthat/test-cs_pssm.R
tests/testthat/test-discrete_cosin.R
tests/testthat/test-k_seperated.R
tests/testthat/test-kiderafactor.R
tests/testthat/test-lpc_pssm.R
tests/testthat/test-pse_pssm.R
tests/testthat/test-pssm_sd.R
tests/testthat/test-single_average.R
tests/testthat/test-smooted_pssm.R
tests/testthat/test-somaPssm.R
tests/testthat/test-svd-pssm.R
vignettes/.gitignore
vignettes/PSSMCOOL.R
vignettes/PSSMCOOL.Rmd
vignettes/PSSMCOOL.html
vignettes/PSSMCOOL_edit
vignettes/PSSMCOOL_edit2.Rmd
vignettes/custom.css
vignettes/figures/AB-PSSM.jpg
vignettes/figures/EEDP.jpg
vignettes/figures/SCSH2.jpg
vignettes/figures/cc-pssm.jpg
vignettes/figures/disulfid.jpg
vignettes/figures/dpc-pssm.jpg
vignettes/figures/dwt.jpg
vignettes/figures/feature_table.jpg
vignettes/figures/k-separated.jpg
vignettes/figures/pse-pssm.jpg
vignettes/figures/pssm400.jpg
vignettes/figures/pssm_ac.jpg
vignettes/figures/pssmsd.jpg
vignettes/figures/s-fpssm.jpg
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vignettes/ieee.csl
vignettes/references_jadid.bib
