| accept_package | Accept a package on the tracker |
| add_data_experiment_permisions | Helper function to Add Data Experiment Permissions |
| add_packages | Add packages to SVN |
| add_software_permisions | Helper function to Add Software Permissions |
| add_to_spreadsheet | Add packages to the tracking worksheet |
| as.issue | Coerce to an issue object |
| assign_new_packages | Assign new packages |
| assign_package | Assign a specific package |
| bioc_views_classification | Extract and validiate biocViews terms from tarball |
| clean | Clean a Software Package |
| clean_data_package | Clean and copy a Data Experiment package |
| devteam | Members of the devteam |
| download | Download attachments from an issue |
| edit_data_experiment_permissions | Edit the data experiment permissions |
| edit_software_permissions | Edit the software permissions |
| Extract the email from an object | |
| emailMaintainer | Email a new user their credentials |
| gh_issue | Retrieve all messages associated with an issue |
| gh_packages_assigned_to | Show packages assigned to a github user |
| gh_pre_accepted_packages | Show pre-accepted packages |
| gh_tracker_search | Query the issue tracker |
| gh_unassigned_packages | Show unassigned packages |
| github_usernames | and their github usernames |
| issue | Retrieve all of the messages from an issue |
| maintainers | Retrieve the maintainers from a tarball |
| make_github_request | Make a GitHub API request using an OAuth token |
| match_user | See if a person already exists in the user db |
| package_assignment_email | Generate the package assignments email given code to run |
| package_name | Extract a packages name from a tarball |
| post | Post a message to an issue |
| proj_path | Path to file (in the unix sense) within the project |
| read_permissions | Read authz permission file |
| request_credentials | Request new credentials for users |
| run_commands | Run commands on a file, possibly remote. |
| standard_commit_message | Generate a standard commit message for permission edits |
| status_map | Status code to name mapping |
| svn | Declare an SVN instance |
| svn_auth_text | Update svn authz files |
| tabulate_activity | Tabulate tracker activity |
| the | storage object |
| tracker_login | Login to the issue tracker |
| tracker_search | Query the issue tracker |
| user_db | Retrieve the remote user database |
| users | Retrieve the user list |
| utilFunctions | Convenience functions for managing behind the scenes... |
| workflow_standard | Workflow steps |
| write_permissions | Write authz permission file |
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