Global functions | |
---|---|
.BiocParallelParam_prototype | Man page |
.DONE | Source code |
.EXEC | Source code |
.NULLRegistry | Source code |
.NULLcluster | Source code |
.RNGstream | Source code |
.VALUE | Source code |
.batch_bptimeout | Source code |
.batchtoolsClusterAvailable | Source code |
.bpallok | Source code |
.bpeltok | Source code |
.bpforkChild | Source code |
.bpforkConnect | Source code |
.bpinit | Source code |
.bpiterate_impl | Man page Source code |
.bplapply_impl | Man page Source code |
.bploop_impl | Source code |
.bploop_iterate_iter | Source code |
.bploop_lapply_iter | Source code |
.bploop_rng_iter | Source code |
.bpnextRNGstream | Source code |
.bpparamOptions | Source code |
.bpregistryargs | Source code |
.bpresources | Source code |
.bpsaveregistry | Source code |
.bpsaveregistry_path | Source code |
.bpstart_error_handler | Source code |
.bpstart_impl | Man page Source code |
.bpstart_makeCluster | Source code |
.bpstart_set_finalizer | Source code |
.bpstart_set_rng_stream | Source code |
.bpstop_impl | Man page Source code |
.bpstop_nodes | Source code |
.bptemplate | Source code |
.bpvalidateEnvironment | Source code |
.bpvalidateSymbol | Source code |
.bpvalidateUnknown | Source code |
.bpworker_EXEC | Source code |
.bpworker_impl | Man page Source code |
.bpwriteLog | Source code |
.clean_task_static | Source code |
.clear_cluster | Source code |
.close | Man page |
.close,ANY-method | Man page |
.close,TransientMulticoreParam-method | Man page |
.collect_result | Source code |
.composeBatchtools | Source code |
.composeTry | Source code |
.connect_timeout | Source code |
.controlled | Source code |
.defaultWorkers | Source code |
.dir_valid_rw | Source code |
.enforceWorkers | Source code |
.error | Source code |
.error_bplist | Source code |
.error_not_available | Source code |
.error_remote | Source code |
.error_unevaluated | Source code |
.error_worker_comm | Source code |
.filterDefaultPackages | Source code |
.filterLibraries | Source code |
.findVariables | Source code |
.getDotsForMapply | Source code |
.hostname | Source code |
.iterateReducer | Source code |
.lapplyReducer | Source code |
.load_task_static | Source code |
.log_buffer_append | Source code |
.log_buffer_get | Source code |
.log_buffer_init | Source code |
.log_error | Source code |
.log_load | Source code |
.log_warn | Source code |
.manager | Man page |
.manager,ANY-method | Man page |
.manager,DoparParam-method | Man page |
.manager,SnowParam-method | Man page |
.manager,TransientMulticoreParam-method | Man page |
.manager_ANY | Source code |
.manager_capacity | Man page |
.manager_capacity,ANY-method | Man page |
.manager_capacity,DoparParamManager-method | Man page |
.manager_capacity,TaskManager-method | Man page |
.manager_cleanup | Man page |
.manager_cleanup,ANY-method | Man page |
.manager_cleanup,SOCKmanager-method | Man page |
.manager_cleanup,TaskManager-method | Man page |
.manager_flush | Man page |
.manager_flush,ANY-method | Man page |
.manager_flush,TaskManager-method | Man page |
.manager_log | Source code |
.manager_recv | Man page |
.manager_recv,ANY-method | Man page |
.manager_recv,DoparParamManager-method | Man page |
.manager_recv,TaskManager-method | Man page |
.manager_recv_all | Man page |
.manager_recv_all,ANY-method | Man page |
.manager_recv_all,DoparParamManager-method | Man page |
.manager_recv_all,TaskManager-method | Man page |
.manager_result_save | Source code |
.manager_send | Man page |
.manager_send,ANY-method | Man page |
.manager_send,DoparParamManager-method | Man page |
.manager_send,SOCKmanager-method | Man page |
.manager_send,TaskManager-method | Man page |
.manager_send_all | Man page |
.manager_send_all,ANY-method | Man page |
.manager_send_all,DoparParamManager-method | Man page |
.manager_send_all,TaskManager-method | Man page |
.ntask | Source code |
.port | Source code |
.prettyPath | Source code |
.progress | Source code |
.prototype_update | Man page Source code |
.recv | Man page |
.recv,ANY-method | Man page |
.recv,SOCKnode-method | Man page |
.recv,TransientMulticoreParam-method | Man page |
.recv_all | Man page |
.recv_all,ANY-method | Man page |
.recv_all,TransientMulticoreParam-method | Man page |
.recv_any | Man page |
.recv_any,ANY-method | Man page |
.recv_any,SerialBackend-method | Man page |
.recv_any,TransientMulticoreParam-method | Man page |
.redo_env | Source code |
.redo_index | Source code |
.redo_index_iterate | Source code |
.redo_reducer | Source code |
.redo_seed | Source code |
.registerOption | Man page Source code |
.registeredOptions | Source code |
.registry_init | Source code |
.rename | Source code |
.rng_get_generator | Source code |
.rng_init_stream | Source code |
.rng_iterate_substream | Source code |
.rng_next_stream | Source code |
.rng_next_substream | Source code |
.rng_reset_generator | Source code |
.send | Man page |
.send,ANY-method | Man page |
.send,TransientMulticoreParam-method | Man page |
.send_all | Man page |
.send_all,ANY-method | Man page |
.send_to | Man page |
.send_to,ANY-method | Man page |
.send_to,SerialBackend-method | Man page |
.send_to,TransientMulticoreParam-method | Man page |
.show_bpvalidateSearch | Source code |
.show_bpvalidateUnknown | Source code |
.simplify | Source code |
.snowCores | Source code |
.snowCoresMax | Source code |
.snowHost | Source code |
.snowPort | Source code |
.splitX | Source code |
.stop | Source code |
.task_const | Man page Source code |
.task_dynamic | Man page Source code |
.task_remake | Man page Source code |
.transposeArgsWithIterations | Source code |
.validateBpoptions | Source code |
.warning | Source code |
.workerEnvironmentVariable | Source code |
.workerLapply_impl | Source code |
.workerOptions | Source code |
BIOCPARALLEL_WORKER_MAX | Man page |
BIOCPARALLEL_WORKER_NUMBER | Man page |
BPValidate | Source code |
BPValidate-class | Man page |
BatchJobsParam | Man page Source code |
BatchtoolsParam | Man page Source code |
BatchtoolsParam-class | Man page |
BiocParallel | Man page |
BiocParallel-deprecated | Man page |
BiocParallel-package | Man page |
BiocParallelParam | Man page |
BiocParallelParam-class | Man page |
DoparParam | Man page Source code |
DoparParam-class | Man page |
MulticoreParam | Man page Source code |
MulticoreParam-class | Man page |
R_PARALLELLY_AVAILABLECORES_FALLBACK | Man page |
SerialParam | Man page Source code |
SerialParam-class | Man page |
SnowParam | Man page Source code |
SnowParam-class | Man page |
TransientMulticoreParam | Source code |
`.RNGstream<-` | Source code |
`.bpparamOptions<-` | Source code |
`.redo_env<-` | Source code |
`.redo_reducer<-` | Source code |
`.redo_seed<-` | Source code |
`print.bplist_error` | Source code |
batchtoolsCluster | Man page Source code |
batchtoolsRegistryargs | Man page Source code |
batchtoolsTemplate | Man page Source code |
batchtoolsWorkers | Man page Source code |
bpRNGseed | Man page |
bpRNGseed,BatchtoolsParam-method | Man page |
bpRNGseed,BiocParallelParam-method | Man page |
bpRNGseed<- | Man page |
bpRNGseed<-,BatchtoolsParam,numeric-method | Man page |
bpRNGseed<-,BiocParallelParam,NULL-method | Man page |
bpRNGseed<-,BiocParallelParam,numeric-method | Man page |
bpaggregate | Man page |
bpaggregate,ANY,missing-method | Man page |
bpaggregate,data.frame,BiocParallelParam-method | Man page |
bpaggregate,formula,BiocParallelParam-method | Man page |
bpaggregate,matrix,BiocParallelParam-method | Man page |
bpbackend | Man page |
bpbackend,BatchtoolsParam-method | Man page |
bpbackend,DoparParam-method | Man page |
bpbackend,SerialParam-method | Man page |
bpbackend,SnowParam-method | Man page |
bpbackend,TransientMulticoreParam-method | Man page |
bpbackend,missing-method | Man page |
bpbackend<- | Man page |
bpbackend<-,DoparParam,SOCKcluster-method | Man page |
bpbackend<-,SnowParam,cluster-method | Man page |
bpbackend<-,missing,ANY-method | Man page |
bperrorTypes | Man page Source code |
bpexportglobals | Man page |
bpexportglobals,BiocParallelParam-method | Man page |
bpexportglobals<- | Man page |
bpexportglobals<-,BiocParallelParam,logical-method | Man page |
bpexportvariables | Man page |
bpexportvariables,BiocParallelParam-method | Man page |
bpexportvariables<- | Man page |
bpexportvariables<-,BiocParallelParam,logical-method | Man page |
bpfallback | Man page |
bpfallback,BiocParallelParam-method | Man page |
bpfallback<- | Man page |
bpfallback<-,BiocParallelParam,logical-method | Man page |
bpforceGC | Man page |
bpforceGC,BiocParallelParam-method | Man page |
bpforceGC<- | Man page |
bpforceGC<-,BiocParallelParam,numeric-method | Man page |
bpisup | Man page |
bpisup,ANY-method | Man page |
bpisup,BatchtoolsParam-method | Man page |
bpisup,DoparParam-method | Man page |
bpisup,MulticoreParam-method | Man page |
bpisup,SerialParam-method | Man page |
bpisup,SnowParam-method | Man page |
bpisup,missing-method | Man page |
bpiterate | Man page |
bpiterate,ANY,ANY,BatchtoolsParam-method | Man page |
bpiterate,ANY,ANY,BiocParallelParam-method | Man page |
bpiterate,ANY,ANY,DoparParam-method | Man page |
bpiterate,ANY,ANY,SerialParam-method | Man page |
bpiterate,ANY,ANY,SnowParam-method | Man page |
bpiterate,ANY,ANY,missing-method | Man page |
bpiterateAlong | Man page Source code |
bpjobname | Man page |
bpjobname,BiocParallelParam-method | Man page |
bpjobname<- | Man page |
bpjobname<-,BiocParallelParam,character-method | Man page |
bplapply | Man page |
bplapply,ANY,BatchtoolsParam-method | Man page |
bplapply,ANY,BiocParallelParam-method | Man page |
bplapply,ANY,DoparParam-method | Man page |
bplapply,ANY,SerialParam-method | Man page |
bplapply,ANY,SnowParam-method | Man page |
bplapply,ANY,list-method | Man page |
bplapply,ANY,missing-method | Man page |
bplog | Man page |
bplog,BiocParallelParam-method | Man page |
bplog,SerialParam-method | Man page |
bplog,SnowParam-method | Man page |
bplog<- | Man page |
bplog<-,SerialParam,logical-method | Man page |
bplog<-,SnowParam,logical-method | Man page |
bplogdir | Man page |
bplogdir,BatchtoolsParam-method | Man page |
bplogdir,BiocParallelParam-method | Man page |
bplogdir,SerialParam-method | Man page |
bplogdir<- | Man page |
bplogdir<-,BatchtoolsParam,character-method | Man page |
bplogdir<-,BiocParallelParam,character-method | Man page |
bplogdir<-,SerialParam,character-method | Man page |
bploop | Man page Source code |
bploop.iterate | Man page Source code |
bploop.iterate_batchtools | Source code |
bploop.lapply | Man page Source code |
bpmapply | Man page |
bpmapply,ANY,BiocParallelParam-method | Man page |
bpmapply,ANY,list-method | Man page |
bpmapply,ANY,missing-method | Man page |
bpnworkers | Man page Source code |
bpok | Man page Source code |
bpoptions | Man page Source code |
bpparam | Man page Source code |
bpprogressbar | Man page |
bpprogressbar,BiocParallelParam-method | Man page |
bpprogressbar<- | Man page |
bpprogressbar<-,BiocParallelParam,logical-method | Man page |
bpresult | Man page Source code |
bpresultdir | Man page |
bpresultdir,BiocParallelParam-method | Man page |
bpresultdir<- | Man page |
bpresultdir<-,BiocParallelParam,character-method | Man page |
bprunMPIslave | Man page Source code |
bprunMPIworker | Man page Source code |
bpschedule | Man page |
bpschedule,ANY-method | Man page |
bpschedule,BatchtoolsParam-method | Man page |
bpschedule,MulticoreParam-method | Man page |
bpschedule,missing-method | Man page |
bpstart | Man page |
bpstart,ANY-method | Man page |
bpstart,BatchtoolsParam-method | Man page |
bpstart,BiocParallelParam-method | Man page |
bpstart,DoparParam-method | Man page |
bpstart,SerialParam-method | Man page |
bpstart,SnowParam-method | Man page |
bpstart,TransientMulticoreParam-method | Man page |
bpstart,missing-method | Man page |
bpstop | Man page |
bpstop,ANY-method | Man page |
bpstop,BatchtoolsParam-method | Man page |
bpstop,BiocParallelParam-method | Man page |
bpstop,DoparParam-method | Man page |
bpstop,SerialParam-method | Man page |
bpstop,SnowParam-method | Man page |
bpstop,TransientMulticoreParam-method | Man page |
bpstop,missing-method | Man page |
bpstopOnError | Man page |
bpstopOnError,BiocParallelParam-method | Man page |
bpstopOnError<- | Man page |
bpstopOnError<-,BiocParallelParam,logical-method | Man page |
bpstopOnError<-,DoparParam,logical-method | Man page |
bptasks | Man page |
bptasks,BiocParallelParam-method | Man page |
bptasks<- | Man page |
bptasks<-,BiocParallelParam,ANY-method | Man page |
bptasks<-,BiocParallelParam-method | Man page |
bpthreshold | Man page |
bpthreshold,BiocParallelParam-method | Man page |
bpthreshold,SnowParam-method | Man page |
bpthreshold<- | Man page |
bpthreshold<-,SerialParam,character-method | Man page |
bpthreshold<-,SnowParam,character-method | Man page |
bptimeout | Man page |
bptimeout,BiocParallelParam-method | Man page |
bptimeout<- | Man page |
bptimeout<-,BiocParallelParam,numeric-method | Man page |
bptry | Man page Source code |
bpvalidate | Man page Source code |
bpvec | Man page |
bpvec,ANY,BiocParallelParam-method | Man page |
bpvec,ANY,list-method | Man page |
bpvec,ANY,missing-method | Man page |
bpvectorize | Man page |
bpvectorize,ANY,ANY-method | Man page |
bpvectorize,ANY,missing-method | Man page |
bpworkers | Man page |
bpworkers,BatchtoolsParam-method | Man page |
bpworkers,BiocParallelParam-method | Man page |
bpworkers,DoparParam-method | Man page |
bpworkers,SerialParam-method | Man page |
bpworkers,SnowParam-method | Man page |
bpworkers,missing-method | Man page |
bpworkers<- | Man page |
bpworkers<-,MulticoreParam,numeric-method | Man page |
bpworkers<-,SnowParam,character-method | Man page |
bpworkers<-,SnowParam,numeric-method | Man page |
coerce,SOCKcluster,DoparParam-method | Man page |
coerce,SOCKcluster,SnowParam-method | Man page |
coerce,spawnedMPIcluster,SnowParam-method | Man page |
cpp_ipc_lock | Source code |
cpp_ipc_locked | Source code |
cpp_ipc_remove | Source code |
cpp_ipc_reset | Source code |
cpp_ipc_try_lock | Source code |
cpp_ipc_unlock | Source code |
cpp_ipc_uuid | Source code |
cpp_ipc_value | Source code |
cpp_ipc_yield | Source code |
ipcid | Man page Source code |
ipclock | Man page Source code |
ipclocked | Man page Source code |
ipcremove | Man page Source code |
ipcreset | Man page Source code |
ipctrylock | Man page Source code |
ipcunlock | Man page Source code |
ipcvalue | Man page Source code |
ipcyield | Man page Source code |
length,SerialBackend-method | Man page |
length,TransientMulticoreParam-method | Man page |
multicoreWorkers | Man page Source code |
print.NULLRegistry | Source code |
print.remote_error | Man page Source code |
register | Man page Source code |
registered | Man page Source code |
show,BPValidate-method | Man page |
show,BatchtoolsParam-method | Man page |
show,BiocParallel-method | Man page |
show,DoparParam-method | Man page |
show,MulticoreParam-method | Man page |
show,SnowParam-method | Man page |
snowWorkers | Man page Source code |
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