API for Bioconductor/GenomicDataCommons
NIH / NCI Genomic Data Commons Access

Global functions
.binary_op Source code
.cat0 Source code
.combine_op Source code
.dir_validate_or_create Source code
.gdcCheckExpands Source code
.gdcRectifyFieldsForEntity Source code
.gdc_download_one Source code
.gdc_file_rename Source code
.gdc_get Source code
.gdc_header_elt Source code
.gdc_post Source code
.get_mapping_json Source code
.id_field Source code
.ifNullCharacterZero Source code
.manifestCall Source code
.missing_op Source code
.negate_op Source code
.parameter_string Source code
.prepareResults Source code
.response_json_as_list Source code
.response_mapping_as_list Source code
.response_warnings Source code
.response_xml_as_data_frame Source code
.wrapstr Source code
GDCQuery Man page
GDCResponse Man page
GenomicDataCommons Man page
GenomicDataCommons-package Man page
aggregations Man page Source code
aggregations.GDCQuery Man page Source code
aggregations.GDCResponse Man page Source code
annotations Man page Source code
available_expand Man page Source code
available_expand.GDCQuery Man page Source code
available_expand.character Man page Source code
available_fields Man page Source code
available_fields.GDCQuery Man page Source code
available_fields.character Man page Source code
available_values Man page Source code
cases Man page Source code
cnv_occurrences Man page Source code
cnvs Man page Source code
count Man page Source code
count.GDCQuery Man page Source code
count.GDCResponse Man page Source code
default_fields Man page Source code
default_fields.GDCQuery Man page Source code
default_fields.character Man page Source code
endpoints Man page Source code
entity_name Man page Source code
entity_name.GDCQuery Man page Source code
entity_name.GDCResults Man page Source code
expand Man page Source code
expand.GDCQuery Man page Source code
facet Man page Source code
facet.GDCQuery Source code
field_description Man page Source code
field_description.GDCQuery Man page Source code
field_description.character Man page Source code
files Man page Source code
filter Man page Source code
filter.GDCQuery Man page Source code
filtering Man page
gdc_cache Man page Source code
gdc_client Man page Source code
gdc_client_version Source code
gdc_client_version_validate Man page Source code
gdc_clinical Man page Source code
gdc_set_cache Man page Source code
gdc_token Man page Source code
gdcdata Man page Source code
genes Man page Source code
get_facets Man page Source code
get_facets.GDCQuery Man page Source code
get_filter Man page Source code
get_filter.GDCQuery Man page Source code
grep_fields Man page Source code
id_field Man page Source code
id_field.GDCQuery Man page Source code
id_field.GDCResults Man page Source code
ids Man page Source code
ids.GDCManifest Man page Source code
ids.GDCQuery Man page Source code
ids.GDCResponse Man page Source code
ids.GDCResults Man page Source code
make_filter Man page Source code
manifest Man page Source code
manifest.GDCcasesResponse Man page Source code
manifest.GDCfilesResponse Man page Source code
manifest.gdc_files Man page Source code
mapping Man page Source code
parameters Man page Source code
print.gdc_endpoints Source code
print.gdc_parameters Source code
projects Man page Source code
query Man page Source code
readDNAcopy Man page Source code
readHTSeqFile Man page Source code
response Man page Source code
response.GDCQuery Man page Source code
response_all Man page Source code
results Man page Source code
results.GDCQuery Man page Source code
results.GDCResponse Man page Source code
results_all Man page Source code
results_all.GDCQuery Man page Source code
results_all.GDCResponse Man page Source code
select Man page Source code
select.GDCQuery Man page Source code
slicing Man page Source code
ssm_occurrences Man page Source code
ssms Man page Source code
status Man page Source code
transfer Man page Source code
transfer_help Man page Source code
write_manifest Man page Source code
Bioconductor/GenomicDataCommons documentation built on Oct. 31, 2024, 7 a.m.