Man pages for BiomarkABS/PITcleanr
Cleans up PIT tag capture histories
| addDirection | Add Direction |
| addParentChildNodes | Add Nodes to Parent-Child Table |
| buildCapHist | Build capture history |
| buildConfig | Build configuration file |
| buildNodeGraph | Build Graph of Nodes |
| buildNodeOrder | Build Node Order |
| buildParentChild | Build a Parent-Child table |
| buildPaths | Build Possible Paths |
| compress | Compress PTAGIS Data |
| compressDART | Compress Detections from DART Query |
| defineCapHistCols | Define Column Names for Capture History Matrix |
| editParentChild | Edit a Parent-Child table |
| estimateFinalLoc | Final location |
| estNodeEff | Node Efficiency |
| extractSites | Extract Sites |
| extractTagObs | Tag Detections |
| filterDetections | Determine Detections to Keep |
| findDwnstrmHydroseg | Find Hydro Segment of Downstream Site |
| findDwnstrmSite | Determine next downstream site |
| findDwnStrmSite_RKM | Find downstream site |
| getNodeInfo | Compile information about each node |
| listParents | List Parent Locations |
| plotNodes | Detection Node Schematic |
| prepWrapper | Prepare Data for DABOM |
| qcTagHistory | Quality Check Complete Tag Histories |
| queryCapHist | PTAGIS Detection History |
| queryFlowlines | Download NHDPlus flow lines |
| queryInterrogationConfig | PTAGIS Interrogation sites configuration |
| queryInterrogationMeta | PTAGIS Interagation sites metadata |
| queryMRRDataFile | PTAGIS MRR Data File |
| queryMRRMeta | PTAGIS MRR sites |
| queryObsDART | Query DART for observations of PIT tags |
| queryPtagisMeta | Query PTAGIS Site Metadata |
| queryTagEvents | PTAGIS PIT Tag Events |
| queryTagsDART | Query DART for list of PIT tags |
| queryTimerTagSite | PTAGIS Test Tag Detections |
| readCTH | Read In Complete Tag History |
| readTestTag | Read In Test Tag Data |
| summarizeTagData | Tag Summary |
| writeLGRNodeNetwork | LGR Node Network |
| writeOldNetworks | Old Node Networks |
| writePRDNodeNetwork | Priest Dam Node Network |
| writePRONodeNetwork | Prosser Dam Node Network |
| writeTUMNodeNetwork | Tumwater Node Network |
| writeTUMNodeNetwork_noUWE | Tumwater Node Network |
