Files in BoevaLab/CHIPIN
ChIP-seq Intersample Normalization
.Rbuildignore
.gitignore
CHIPIN.Rproj
DESCRIPTION
LICENSE
Meta/vignette.rds
NAMESPACE
R/functions_CHIPIN.R
README.md
data/A_hg19.RData
data/A_hg38.RData
data/A_mm10.RData
data/A_mm9.RData
data/TSS_hg19.RData
data/TSS_hg38.RData
data/TSS_mm10.RData
data/TSS_mm9.RData
data/allgenes_hg19.RData
data/allgenes_hg38.RData
data/allgenes_mm10.RData
data/allgenes_mm9.RData
data/test/CLBBER.K27ac.rep3.mat.gz
data/test/neuroblastomaCPMmeanVSsd.pdf
data/test/neuroblastomaGenesNotMoving.bed
data/test_expression/expression.pdf
doc/CHIPIN-vignette.R
doc/CHIPIN-vignette.Rmd
doc/CHIPIN-vignette.html
inst/extdata/CLBBER.K27ac.rep3.bw
inst/extdata/CLBMA.K27ac.rep3.bw
inst/extdata/FPKM_values_CLBBER_CLBMA_SJNB12.txt
inst/extdata/SJNB12.K27ac.rep3.bw
man/CHIPIN_normalize.Rd
man/plot_expression.Rd
vignettes/.gitignore
vignettes/After_NormalisationLinear.png
vignettes/After_NormalisationQuantile.png
vignettes/Before_Normalisation-1.png
vignettes/CHIPIN-vignette.Rmd
vignettes/bedGenesNotmoving.png
vignettes/expression-1.png
vignettes/fig2-page-001.jpeg
vignettes/figS2-page-001.jpg
vignettes/figS2.pdf
vignettes/igv_screen.png
vignettes/neuroblastomaCPMmeanVSsd.pdf
vignettes/neuroblastomaCPMmeanVSsd.png
vignettes/paths.png
