Files in BriceonWiley/IntegratedLikelihood.R
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/Score_phi.R
R/Wald_gam.R
R/Wald_phi.R
R/adj_intLik_p.R
R/calculate_mles_binom.R
R/calculate_mles_pois.R
R/check_zeros.R
R/coverage_gam.R
R/coverage_p.R
R/coverage_phi.R
R/hessian_matrix.R
R/info_matrix.R
R/intLik_gam.R
R/intLik_p.R
R/intLik_phi.R
R/likelihood_expanded.R
R/likelihood_gam.R
R/likelihood_gam_closed.R
R/likelihood_orig_p.R
R/likelihood_orig_phi.R
R/likelihood_p.R
R/likelihood_p_closed.R
R/likelihood_phi.R
R/likelihood_phi_closed.R
R/likelihood_ratio_gam.R
R/likelihood_ratio_p.R
R/likelihood_ratio_phi.R
R/log_likelihood_phi.R
R/mWald_p.R
R/produce_samples.R
R/score_function_phi.R
R/score_values_phi.R
R/simulate_gamma.R
R/simulate_p.R
R/simulate_phi.R
R/width_gam.R
R/width_p.R
R/width_phi.R
README.md
comparingCIs.R.Rproj
files/Score attempt for p.pdf
files/closed form for p.pdf
files/closed form gamma.pdf
man/Score_phi.Rd
man/Wald_gam.Rd
man/Wald_phi.Rd
man/adj_intLik_p.Rd
man/calculate_mles_binom.Rd
man/calculate_mles_pois.Rd
man/check_zeros.Rd
man/coverage_gam.Rd
man/coverage_p.Rd
man/coverage_phi.Rd
man/hessian_matrix.Rd
man/info_matrix.Rd
man/intLik_gam.Rd
man/intLik_p.Rd
man/intLik_phi.Rd
man/likelihood_expanded.Rd
man/likelihood_gam.Rd
man/likelihood_gam_closed.Rd
man/likelihood_orig_p.Rd
man/likelihood_orig_phi.Rd
man/likelihood_p.Rd
man/likelihood_p_closed.Rd
man/likelihood_phi.Rd
man/likelihood_phi_closed.Rd
man/likelihood_ratio_gam.Rd
man/likelihood_ratio_p.Rd
man/likelihood_ratio_phi.Rd
man/log_likelihood_phi.Rd
man/mWald_p.Rd
man/produce_samples.Rd
man/score_likelihood_phi.Rd
man/score_vals_phi.Rd
man/simulate_gamma.Rd
man/simulate_p.Rd
man/simulate_phi.Rd
man/width_gam.Rd
man/width_p.Rd
man/width_phi.Rd
simulation results/.Rapp.history
simulation results/check_sims.R
simulation results/choosing_k.R
simulation results/combine results.R
simulation results/get_plots.R
simulation results/plot in 3d.R
simulation results/prelim_gamma_results.R
simulation results/results_gam/full_gamma_results.pdf
simulation results/results_gam/gamma_results.Rmd
simulation results/results_gam/individual results/results_N_050_p_0.05.rds
simulation results/results_gam/individual results/results_N_050_p_0.10.rds
simulation results/results_gam/individual results/results_N_050_p_0.15.rds
simulation results/results_gam/individual results/results_N_050_p_0.20.rds
simulation results/results_gam/individual results/results_N_050_p_0.25.rds
simulation results/results_gam/individual results/results_N_050_p_0.30.rds
simulation results/results_gam/individual results/results_N_050_p_0.35.rds
simulation results/results_gam/individual results/results_N_050_p_0.40.rds
simulation results/results_gam/individual results/results_N_050_p_0.45.rds
simulation results/results_gam/individual results/results_N_050_p_0.50.rds
simulation results/results_gam/individual results/results_N_050_p_0.55.rds
simulation results/results_gam/individual results/results_N_050_p_0.60.rds
simulation results/results_gam/individual results/results_N_050_p_0.65.rds
simulation results/results_gam/individual results/results_N_050_p_0.70.rds
simulation results/results_gam/individual results/results_N_050_p_0.75.rds
simulation results/results_gam/individual results/results_N_050_p_0.80.rds
simulation results/results_gam/individual results/results_N_050_p_0.85.rds
simulation results/results_gam/individual results/results_N_050_p_0.90.rds
simulation results/results_gam/individual results/results_N_050_p_0.95.rds
simulation results/results_gam/individual results/results_N_100_p_0.05.rds
simulation results/results_gam/individual results/results_N_100_p_0.10.rds
simulation results/results_gam/individual results/results_N_100_p_0.15.rds
simulation results/results_gam/individual results/results_N_100_p_0.20.rds
simulation results/results_gam/individual results/results_N_100_p_0.25.rds
simulation results/results_gam/individual results/results_N_100_p_0.30.rds
simulation results/results_gam/individual results/results_N_100_p_0.35.rds
simulation results/results_gam/individual results/results_N_100_p_0.40.rds
simulation results/results_gam/individual results/results_N_100_p_0.45.rds
simulation results/results_gam/individual results/results_N_100_p_0.50.rds
simulation results/results_gam/individual results/results_N_100_p_0.55.rds
simulation results/results_gam/individual results/results_N_100_p_0.60.rds
simulation results/results_gam/individual results/results_N_100_p_0.65.rds
simulation results/results_gam/individual results/results_N_100_p_0.70.rds
simulation results/results_gam/individual results/results_N_100_p_0.75.rds
simulation results/results_gam/individual results/results_N_100_p_0.80.rds
simulation results/results_gam/individual results/results_N_100_p_0.85.rds
simulation results/results_gam/individual results/results_N_100_p_0.90.rds
simulation results/results_gam/individual results/results_N_100_p_0.95.rds
simulation results/results_gam/individual results/results_N_150_p_0.05.rds
simulation results/results_gam/individual results/results_N_150_p_0.10.rds
simulation results/results_gam/individual results/results_N_150_p_0.15.rds
simulation results/results_gam/individual results/results_N_150_p_0.20.rds
simulation results/results_gam/individual results/results_N_150_p_0.25.rds
simulation results/results_gam/individual results/results_N_150_p_0.30.rds
simulation results/results_gam/individual results/results_N_150_p_0.35.rds
simulation results/results_gam/individual results/results_N_150_p_0.40.rds
simulation results/results_gam/individual results/results_N_150_p_0.45.rds
simulation results/results_gam/individual results/results_N_150_p_0.50.rds
simulation results/results_gam/individual results/results_N_150_p_0.55.rds
simulation results/results_gam/individual results/results_N_150_p_0.60.rds
simulation results/results_gam/individual results/results_N_150_p_0.65.rds
simulation results/results_gam/individual results/results_N_150_p_0.70.rds
simulation results/results_gam/individual results/results_N_150_p_0.75.rds
simulation results/results_gam/individual results/results_N_150_p_0.80.rds
simulation results/results_gam/individual results/results_N_150_p_0.85.rds
simulation results/results_gam/individual results/results_N_150_p_0.90.rds
simulation results/results_gam/individual results/results_N_150_p_0.95.rds
simulation results/results_gam/individual results/results_N_200_p_0.05.rds
simulation results/results_gam/individual results/results_N_200_p_0.10.rds
simulation results/results_gam/individual results/results_N_200_p_0.15.rds
simulation results/results_gam/individual results/results_N_200_p_0.20.rds
simulation results/results_gam/individual results/results_N_200_p_0.25.rds
simulation results/results_gam/individual results/results_N_200_p_0.30.rds
simulation results/results_gam/individual results/results_N_200_p_0.35.rds
simulation results/results_gam/individual results/results_N_200_p_0.40.rds
simulation results/results_gam/individual results/results_N_200_p_0.45.rds
simulation results/results_gam/individual results/results_N_200_p_0.50.rds
simulation results/results_gam/individual results/results_N_200_p_0.55.rds
simulation results/results_gam/individual results/results_N_200_p_0.60.rds
simulation results/results_gam/individual results/results_N_200_p_0.65.rds
simulation results/results_gam/individual results/results_N_200_p_0.70.rds
simulation results/results_gam/individual results/results_N_200_p_0.75.rds
simulation results/results_gam/individual results/results_N_200_p_0.80.rds
simulation results/results_gam/individual results/results_N_200_p_0.85.rds
simulation results/results_gam/individual results/results_N_200_p_0.90.rds
simulation results/results_gam/individual results/results_N_200_p_0.95.rds
simulation results/results_gam/individual results/results_N_250_p_0.05.rds
simulation results/results_gam/individual results/results_N_250_p_0.10.rds
simulation results/results_gam/individual results/results_N_250_p_0.15.rds
simulation results/results_gam/individual results/results_N_250_p_0.20.rds
simulation results/results_gam/individual results/results_N_250_p_0.25.rds
simulation results/results_gam/individual results/results_N_250_p_0.30.rds
simulation results/results_gam/individual results/results_N_250_p_0.35.rds
simulation results/results_gam/individual results/results_N_250_p_0.40.rds
simulation results/results_gam/individual results/results_N_250_p_0.45.rds
simulation results/results_gam/individual results/results_N_250_p_0.50.rds
simulation results/results_gam/individual results/results_N_250_p_0.55.rds
simulation results/results_gam/individual results/results_N_250_p_0.60.rds
simulation results/results_gam/individual results/results_N_250_p_0.65.rds
simulation results/results_gam/individual results/results_N_250_p_0.70.rds
simulation results/results_gam/individual results/results_N_250_p_0.75.rds
simulation results/results_gam/individual results/results_N_250_p_0.80.rds
simulation results/results_gam/individual results/results_N_250_p_0.85.rds
simulation results/results_gam/individual results/results_N_250_p_0.90.rds
simulation results/results_gam/individual results/results_N_250_p_0.95.rds
simulation results/results_gam/real_data.rds
simulation results/results_gam/real_data_100.rds
simulation results/results_gam/real_data_150.rds
simulation results/results_gam/real_data_200.rds
simulation results/results_gam/real_data_300.rds
simulation results/results_gam/results_050.rds
simulation results/results_gam/results_100.rds
simulation results/results_gam/results_150.rds
simulation results/results_gam/results_200.rds
simulation results/results_gam/results_250.rds
simulation results/results_p_adj/adj_p_results.Rmd
simulation results/results_p_adj/adj_p_results.pdf
simulation results/results_p_adj/big_results.rds
simulation results/results_p_adj/big_results_050.rds
simulation results/results_p_adj/full_n-K_results_p.rds
simulation results/results_p_adj/full_n-p10_results_p.rds
simulation results/results_p_adj/full_n-p30_results_p.rds
simulation results/results_p_adj/full_n-p50_results_p.rds
simulation results/results_p_adj/full_n-p_results_p.rds
simulation results/results_p_adj/full_p-K_results_p.rds
simulation results/results_p_adj/k.rds
simulation results/results_p_adj/k_050.rds
simulation results/results_p_adj/mixed_results_p.rds
simulation results/results_p_adj/n_50_700_k_05_65_p10.rds
simulation results/results_p_adj/res_3d_coverage.rds
simulation results/results_p_adj/res_3d_coverage_big.rds
simulation results/results_p_adj/res_3d_width.rds
simulation results/results_p_adj/summarized_big_results.rds
simulation results/results_pois_data/intervals.csv
simulation results/results_pois_data/ratio of lambdas sim res.R
simulation results/results_pois_data/ratio of lambdas.R
simulation results/results_pois_data/res_cov.rds
simulation results/results_pois_data/res_wid.rds
simulation results/results_pois_data/results.csv
simulation results/results_pois_data/samples.csv
simulation results/verify.rds
simulation results/work_for_gamma_results.R
unused functions/check_zero.R
unused functions/check_zero.Rd
unused functions/likelihood_gam_closed.R
unused functions/review_interval.R
unused functions/review_interval.Rd
unused functions/simulation_full.R
unused functions/simulation_full.Rd
unused functions/simulation_sum.R
unused functions/simulation_sum.Rd
