Budheimer/RSVSim: RSVSim: an R/Bioconductor package for the simulation of structural variations

RSVSim is a package for the simulation of deletions, insertions, inversion, tandem-duplications and translocations of various sizes in any genome available as FASTA-file or BSgenome data package. SV breakpoints can be placed uniformly accross the whole genome, with a bias towards repeat regions and regions of high homology (for hg19) or at user-supplied coordinates.

Getting started

Package details

AuthorChristoph Bartenhagen
Bioconductor views Sequencing
MaintainerChristoph Bartenhagen <c.bartenhagen@uni-koeln.de>
LicenseLGPL-3
Version1.23.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Budheimer/RSVSim")
Budheimer/RSVSim documentation built on May 30, 2019, 1:26 p.m.