Files in CDCgov/SaviR
ITF Situational Awareness and Visualization
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.github/workflows/r.yml
.github/workflows/test-coverage.yaml
.gitignore
CONTRIBUTING.md
DESCRIPTION
DISCLAIMER.md
LICENSE
NAMESPACE
R/calc_riskmatrix.R
R/calc_vax_carryforward.R
R/data.R
R/get_combined_table.R
R/get_context.R
R/get_covid_hist.R
R/get_covid_sources.R
R/get_hospdata.R
R/get_onetable.R
R/get_owid_testing_meta.R
R/get_testing.R
R/get_vaccinations.R
R/helpers.R
R/lookups.R
R/viz_maps.R
R/viz_plots.R
R/viz_tables.R
R/zzz.R
README.Rmd
README.md
SaviR.Rproj
_pkgdown.yml
code-of-conduct.md
codecov.yml
data/country_coords.rda
data/onetable.rda
data/owid_testing_meta.rda
inst/crimea_fixup.R
inst/extdata/.gitignore
inst/extdata/onetable.csv
inst/extdata/usaid_dos_regions.csv
inst/french_guiana_fixup.R
inst/write_shapefile.R
man/bbox_fun.Rd
man/calc_add_risk.Rd
man/calc_vax_carryforward.Rd
man/calc_window_incidence.Rd
man/calc_window_pct_change.Rd
man/cia_wfb_addn_countries.Rd
man/country_coords.Rd
man/datasource_lk.Rd
man/figures/hex-SaviR.png
man/get_combined_table.Rd
man/get_country_coords.Rd
man/get_covid_df.Rd
man/get_covid_hist.Rd
man/get_find_testing_long.Rd
man/get_gdeltnews.Rd
man/get_hospdata.Rd
man/get_onetable.Rd
man/get_owid_testing_long.Rd
man/get_owid_testing_meta.Rd
man/get_preferred_testpos7.Rd
man/get_preferred_tests14.Rd
man/get_testing.Rd
man/get_testing_long.Rd
man/get_vax.Rd
man/get_vax_by_type.Rd
man/get_vax_dates.Rd
man/get_vax_manufacturers.Rd
man/income_aes.Rd
man/manual_iso3_lk.Rd
man/map_burden.Rd
man/map_template.Rd
man/map_trend.Rd
man/map_vaccinations.Rd
man/onetable.Rd
man/onetable_addn_countries.Rd
man/owid_lk.Rd
man/plot_epicurve.Rd
man/plot_epicurve_dailydouble.Rd
man/plot_epicurve_epidouble.Rd
man/plot_epicurve_ind.Rd
man/plot_riskmatrix.Rd
man/plot_vaxcoverage.Rd
man/plot_vaxcoverage_pop.Rd
man/plot_vaxcurve.Rd
man/state_aes.Rd
man/table_10mostcases.Rd
man/table_10vaccinations.Rd
man/table_countriesofconcern.Rd
man/who_aes.Rd
man/who_lk.Rd
man/who_region_lk.Rd
tests/testthat.R
tests/testthat/2021-11-26-testdata-input.RDS
tests/testthat/2021-11-26-testdata-output.RDS
tests/testthat/test-combined_table.R
tests/testthat/test-data_accessors.R
tests/testthat/test-data_sources.R
tests/testthat/test-denominator_data.R
tests/testthat/test-get_testing.R
tests/testthat/test-helpers.R
tests/testthat/test-plot_consistency.R
tests/testthat/test-processing.R
vignettes/prod_sitrep.Rmd
vignettes/routine_report_start_chunk.Rmd
vignettes/savir_version_0.2_api_changes.Rmd
vignettes/testing_demo.Rmd
vignettes/testing_investigation.Rmd
