Man pages for CDCgov/SaviR
ITF Situational Awareness and Visualization
| bbox_fun | Function to get bounding boxes for maps by WHO/DoS region |
| calc_add_risk | calc_add_risk |
| calc_vax_carryforward | Carry-Forward vaccination metrics to latest date |
| calc_window_incidence | Compute average incidence over a set day interval |
| calc_window_pct_change | Compute Percent-change in Cases Over a Specified Window |
| cia_wfb_addn_countries | Countries with no current UNWPP data that are manually... |
| country_coords | Country Coordinates |
| datasource_lk | A list of all data sources used in the package to be updated... |
| get_combined_table | A function to retrieve a dataframe (df) with combined... |
| get_country_coords | get_country_coords |
| get_covid_df | get_covid_df |
| get_covid_hist | Retrieve Current and Archival Reports of Various COVID-19... |
| get_find_testing_long | Pulling and processing OWID Testing Data |
| get_gdeltnews | get_gdeltnews |
| get_hospdata | Get hospitalization data from both OWID and ECDC |
| get_onetable | Generate COVID-19 Country Metadata Table |
| get_owid_testing_long | Pulling and processing OWID Testing Data |
| get_owid_testing_meta | Our World in Data (OWID) Testing Metadata |
| get_preferred_testpos7 | get_preferred_testpos7 |
| get_preferred_tests14 | get_preferred_tests14 |
| get_testing | Get testing data from Our World in Data (OWID) or FIND |
| get_testing_long | get_testing_long |
| get_vax | get_vax |
| get_vax_by_type | Get data on count of vaccinations by vaccine manufacturer... |
| get_vax_dates | Get last non-NA date for key vaccination metrics by country |
| get_vax_manufacturers | get_vax_manufacturers |
| income_aes | Aesthetics for World Bank Country income group |
| manual_iso3_lk | Manual ISO 3166-1 alpha-3 country code entries that don't get... |
| map_burden | Burden Map |
| map_template | map_template |
| map_trend | map_trend |
| map_vaccinations | map_vaccinations |
| onetable | Onetable |
| onetable_addn_countries | Additional entries not acknowledged by WHO but required to... |
| owid_lk | OWID location renamings |
| plot_epicurve | plot_epicurve |
| plot_epicurve_dailydouble | plot_epicurve_dailydouble |
| plot_epicurve_epidouble | plot_epicurve_epidouble |
| plot_epicurve_ind | plot_epicurve_ind |
| plot_riskmatrix | plot_riskmatrix |
| plot_vaxcoverage | plot_vaxcoverage |
| plot_vaxcoverage_pop | plot_vaxcoverage_pop |
| plot_vaxcurve | plot_vaxcurve |
| state_aes | Aesthetics for US Department of State regions |
| table_10mostcases | SaviR Case Tables for Various CDC Documents |
| table_10vaccinations | table_10vaccinations |
| table_countriesofconcern | table_countriesofconcern |
| who_aes | Aesthetics for WHO regions |
| who_lk | WHO Country renamings / rebinnings |
| who_region_lk | WHO "pretty" english region names |
