.Rbuildignore
.github/.gitignore
.github/ISSUE_TEMPLATE/bug_report.md
.github/ISSUE_TEMPLATE/custom.md
.github/ISSUE_TEMPLATE/feature_request.md
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE.txt
NAMESPACE
NEWS.md
R/RcppExports.R
R/batch_processing.R
R/cluster_analysis.R
R/cluster_assignment.R
R/cluster_distances.R
R/cluster_format.R
R/cluster_model.R
R/cluster_plot.R
R/cluster_profiles.R
R/cluster_templates.R
R/data.R
R/globals.R
R/handwriter-package.R
R/index_helpers.R
R/plot.R
R/process_components.R
R/process_graph_features.R
R/process_graphs.R
R/process_nodes.R
R/process_paths.R
R/process_read_image.R
R/process_skeleton.R
R/process_writing.R
R/processing_helpers.R
R/superseded.R
README.md
cran-comments.md
data-raw/example_data.R
data-raw/save_template.R
data-raw/templateK40.rds
data/.DS_Store
data/csafe.rda
data/example_analysis.rda
data/example_cluster_template.rda
data/example_model.rda
data/london.rda
data/message.rda
data/nature1.rda
data/templateK40.rda
data/twoSent.rda
examples/example_template/data/model_docs/w0009_s01_pWOZ_r01.png
examples/example_template/data/model_docs/w0009_s01_pWOZ_r02.png
examples/example_template/data/model_docs/w0009_s01_pWOZ_r03.png
examples/example_template/data/model_docs/w0030_s01_pWOZ_r01.png
examples/example_template/data/model_docs/w0030_s01_pWOZ_r02.png
examples/example_template/data/model_docs/w0030_s01_pWOZ_r03.png
examples/example_template/data/model_docs/w0238_s01_pWOZ_r01.png
examples/example_template/data/model_docs/w0238_s01_pWOZ_r02.png
examples/example_template/data/model_docs/w0238_s01_pWOZ_r03.png
examples/example_template/data/questioned_docs/w0030_s03_pWOZ_r01.png
examples/example_template/data/template.rds
examples/example_template/data/template_docs/w0016_s01_pLND_r01.png
examples/example_template/data/template_docs/w0080_s01_pLND_r01.png
examples/example_template/data/template_docs/w0124_s01_pLND_r01.png
examples/example_template/data/template_docs/w0138_s01_pLND_r01.png
examples/example_template/data/template_docs/w0229_s01_pLND_r01.png
examples/example_template/data/template_graphs/problems.txt
examples/example_template/data/template_graphs/w0016_s01_pLND_r01_proclist.rds
examples/example_template/data/template_graphs/w0080_s01_pLND_r01_proclist.rds
examples/example_template/data/template_graphs/w0124_s01_pLND_r01_proclist.rds
examples/example_template/data/template_graphs/w0138_s01_pLND_r01_proclist.rds
examples/example_template/data/template_graphs/w0229_s01_pLND_r01_proclist.rds
handwriter.Rproj
inst/extdata/phrase_example.png
inst/python/README.md
inst/python/images/w0001_s03_pPHR_r01.png
inst/python/images/w0002_s03_pPHR_r01.png
inst/python/images/w0003_s03_pPHR_r01.png
inst/python/word_separation.R
inst/python/word_separation.ipynb
inst/python/word_separation.py
man/about_variable.Rd
man/addToFeatures.Rd
man/analyze_questioned_documents.Rd
man/calculate_accuracy.Rd
man/cleanBinaryImage.Rd
man/csafe.Rd
man/drop_burnin.Rd
man/example_analysis.Rd
man/example_cluster_template.Rd
man/example_model.Rd
man/extractGraphs.Rd
man/figures/README-image-1.png
man/figures/README-nodes-1.png
man/figures/README-pressure-1.png
man/figures/README-thin-1.png
man/figures/README-unnamed-chunk-10-1.png
man/figures/README-unnamed-chunk-11-1.png
man/figures/README-unnamed-chunk-12-1.png
man/figures/README-unnamed-chunk-15-1.png
man/figures/README-unnamed-chunk-16-1.png
man/figures/README-unnamed-chunk-17-1.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/README-unnamed-chunk-6-1.png
man/figures/README-unnamed-chunk-7-1.png
man/figures/README-unnamed-chunk-8-1.png
man/figures/README-unnamed-chunk-9-1.png
man/fit_model.Rd
man/format_template_data.Rd
man/get_cluster_fill_counts.Rd
man/get_cluster_fill_rates.Rd
man/get_clusters_batch.Rd
man/get_credible_intervals.Rd
man/get_posterior_probabilities.Rd
man/get_writer_profiles.Rd
man/graphToPrototype.Rd
man/handwriter-package.Rd
man/london.Rd
man/make_clustering_template.Rd
man/message.Rd
man/nature1.Rd
man/plotImage.Rd
man/plotImageThinned.Rd
man/plotLetter.Rd
man/plotLine.Rd
man/plotNodes.Rd
man/plot_cluster_centers.Rd
man/plot_cluster_fill_counts.Rd
man/plot_cluster_fill_rates.Rd
man/plot_credible_intervals.Rd
man/plot_graphs.Rd
man/plot_posterior_probabilities.Rd
man/plot_trace.Rd
man/plot_writer_profiles.Rd
man/processDocument.Rd
man/processHandwriting.Rd
man/process_batch_dir.Rd
man/process_batch_list.Rd
man/readPNGBinary.Rd
man/read_and_process.Rd
man/rgb2grayscale.Rd
man/rgba2rgb.Rd
man/templateK40.Rd
man/thinImage.Rd
man/twoSent.Rd
man/whichToFill.Rd
src/.gitignore
src/CleanBinaryImage.cpp
src/ClusterFuncs.cpp
src/Makevars
src/Makevars.win
src/Masks.h
src/MeasurementsCpp.cpp
src/RcppExports.cpp
src/ThinImageCpp.cpp
tests/testthat.R
tests/testthat/fixtures/alpha_channel/alpha.rds
tests/testthat/fixtures/alpha_channel/make_fixtures.R
tests/testthat/fixtures/alpha_channel/w0030_s03_pWOZ_r01.png
tests/testthat/fixtures/batch-processing/docs/w0030_s03_pWOZ_r01.png
tests/testthat/fixtures/batch-processing/docs/w0238_s01_pLND_r01.png
tests/testthat/fixtures/batch-processing/graphs/problems.txt
tests/testthat/fixtures/batch-processing/graphs/w0238_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/batch-processing/make_fixtures.R
tests/testthat/fixtures/temp1qd/data/analysis.rds
tests/testthat/fixtures/temp1qd/data/model.rds
tests/testthat/fixtures/temp1qd/data/model_clusters.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0009_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0009_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0009_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0030_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0030_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0030_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0238_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0238_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp1qd/data/model_clusters/w0238_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp1qd/data/model_counts.rds
tests/testthat/fixtures/temp1qd/data/model_data.rds
tests/testthat/fixtures/temp1qd/data/model_docs/w0009_s01_pWOZ_r01.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0009_s01_pWOZ_r02.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0009_s01_pWOZ_r03.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0030_s01_pWOZ_r01.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0030_s01_pWOZ_r02.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0030_s01_pWOZ_r03.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0238_s01_pWOZ_r01.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0238_s01_pWOZ_r02.png
tests/testthat/fixtures/temp1qd/data/model_docs/w0238_s01_pWOZ_r03.png
tests/testthat/fixtures/temp1qd/data/model_graphs/problems.txt
tests/testthat/fixtures/temp1qd/data/model_graphs/w0009_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0009_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0009_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0030_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0030_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0030_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0238_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0238_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_graphs/w0238_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp1qd/data/model_rates.rds
tests/testthat/fixtures/temp1qd/data/questioned_clusters.rds
tests/testthat/fixtures/temp1qd/data/questioned_clusters/w0030_s03_pWOZ_r01.rds
tests/testthat/fixtures/temp1qd/data/questioned_counts.rds
tests/testthat/fixtures/temp1qd/data/questioned_data.rds
tests/testthat/fixtures/temp1qd/data/questioned_docs/w0030_s03_pWOZ_r01.png
tests/testthat/fixtures/temp1qd/data/questioned_graphs/problems.txt
tests/testthat/fixtures/temp1qd/data/questioned_graphs/w0030_s03_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/questioned_rates.rds
tests/testthat/fixtures/temp1qd/data/read_png_binary.rds
tests/testthat/fixtures/temp1qd/data/read_png_binary_cut-0.5.rds
tests/testthat/fixtures/temp1qd/data/read_png_binary_cut5.rds
tests/testthat/fixtures/temp1qd/data/read_png_binary_invert.rds
tests/testthat/fixtures/temp1qd/data/template.rds
tests/testthat/fixtures/temp1qd/data/template_data_w_outliers.rds
tests/testthat/fixtures/temp1qd/data/template_data_wo_outliers.rds
tests/testthat/fixtures/temp1qd/data/template_docs/w0016_s01_pLND_r01.png
tests/testthat/fixtures/temp1qd/data/template_docs/w0080_s01_pLND_r01.png
tests/testthat/fixtures/temp1qd/data/template_docs/w0124_s01_pLND_r01.png
tests/testthat/fixtures/temp1qd/data/template_docs/w0138_s01_pLND_r01.png
tests/testthat/fixtures/temp1qd/data/template_docs/w0229_s01_pLND_r01.png
tests/testthat/fixtures/temp1qd/data/template_graphs/problems.txt
tests/testthat/fixtures/temp1qd/data/template_graphs/w0016_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/template_graphs/w0080_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/template_graphs/w0124_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/template_graphs/w0138_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp1qd/data/template_graphs/w0229_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp1qd/make_fixtures.R
tests/testthat/fixtures/temp2qd/data/analysis.rds
tests/testthat/fixtures/temp2qd/data/model.rds
tests/testthat/fixtures/temp2qd/data/model_clusters.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0009_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0009_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0009_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0030_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0030_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0030_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0238_s01_pWOZ_r01.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0238_s01_pWOZ_r02.rds
tests/testthat/fixtures/temp2qd/data/model_clusters/w0238_s01_pWOZ_r03.rds
tests/testthat/fixtures/temp2qd/data/model_docs/w0009_s01_pWOZ_r01.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0009_s01_pWOZ_r02.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0009_s01_pWOZ_r03.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0030_s01_pWOZ_r01.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0030_s01_pWOZ_r02.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0030_s01_pWOZ_r03.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0238_s01_pWOZ_r01.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0238_s01_pWOZ_r02.png
tests/testthat/fixtures/temp2qd/data/model_docs/w0238_s01_pWOZ_r03.png
tests/testthat/fixtures/temp2qd/data/model_graphs/problems.txt
tests/testthat/fixtures/temp2qd/data/model_graphs/w0009_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0009_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0009_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0030_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0030_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0030_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0238_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0238_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/temp2qd/data/model_graphs/w0238_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/temp2qd/data/questioned_clusters.rds
tests/testthat/fixtures/temp2qd/data/questioned_clusters/w0030_s03_pWOZ_r01.rds
tests/testthat/fixtures/temp2qd/data/questioned_clusters/w0238_s01_pLND_r01.rds
tests/testthat/fixtures/temp2qd/data/questioned_docs/w0030_s03_pWOZ_r01.png
tests/testthat/fixtures/temp2qd/data/questioned_docs/w0238_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/questioned_graphs/problems.txt
tests/testthat/fixtures/temp2qd/data/questioned_graphs/w0030_s03_pWOZ_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/questioned_graphs/w0238_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/template.rds
tests/testthat/fixtures/temp2qd/data/template_docs/w0016_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/template_docs/w0080_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/template_docs/w0124_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/template_docs/w0138_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/template_docs/w0229_s01_pLND_r01.png
tests/testthat/fixtures/temp2qd/data/template_graphs/problems.txt
tests/testthat/fixtures/temp2qd/data/template_graphs/w0016_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/template_graphs/w0080_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/template_graphs/w0124_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/template_graphs/w0138_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/data/template_graphs/w0229_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/temp2qd/make_fixtures.R
tests/testthat/fixtures/tempK402qd/data/analysis.rds
tests/testthat/fixtures/tempK402qd/data/model.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0009_s01_pWOZ_r01.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0009_s01_pWOZ_r02.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0009_s01_pWOZ_r03.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0030_s01_pWOZ_r01.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0030_s01_pWOZ_r02.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0030_s01_pWOZ_r03.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0238_s01_pWOZ_r01.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0238_s01_pWOZ_r02.rds
tests/testthat/fixtures/tempK402qd/data/model_clusters/w0238_s01_pWOZ_r03.rds
tests/testthat/fixtures/tempK402qd/data/model_docs/w0009_s01_pWOZ_r01.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0009_s01_pWOZ_r02.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0009_s01_pWOZ_r03.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0030_s01_pWOZ_r01.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0030_s01_pWOZ_r02.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0030_s01_pWOZ_r03.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0238_s01_pWOZ_r01.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0238_s01_pWOZ_r02.png
tests/testthat/fixtures/tempK402qd/data/model_docs/w0238_s01_pWOZ_r03.png
tests/testthat/fixtures/tempK402qd/data/model_graphs/problems.txt
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0009_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0009_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0009_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0030_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0030_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0030_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0238_s01_pWOZ_r01_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0238_s01_pWOZ_r02_proclist.rds
tests/testthat/fixtures/tempK402qd/data/model_graphs/w0238_s01_pWOZ_r03_proclist.rds
tests/testthat/fixtures/tempK402qd/data/questioned_clusters.rds
tests/testthat/fixtures/tempK402qd/data/questioned_clusters/w0030_s03_pWOZ_r01.rds
tests/testthat/fixtures/tempK402qd/data/questioned_clusters/w0238_s01_pLND_r01.rds
tests/testthat/fixtures/tempK402qd/data/questioned_docs/w0030_s03_pWOZ_r01.png
tests/testthat/fixtures/tempK402qd/data/questioned_docs/w0238_s01_pLND_r01.png
tests/testthat/fixtures/tempK402qd/data/questioned_graphs/problems.txt
tests/testthat/fixtures/tempK402qd/data/questioned_graphs/w0030_s03_pWOZ_r01_proclist.rds
tests/testthat/fixtures/tempK402qd/data/questioned_graphs/w0238_s01_pLND_r01_proclist.rds
tests/testthat/fixtures/tempK402qd/data/template.rds
tests/testthat/fixtures/tempK402qd/make_fixtures.R
tests/testthat/helpers.R
tests/testthat/test-batch-processing.R
tests/testthat/test-cluster-analysis.R
tests/testthat/test-cluster-assignment.R
tests/testthat/test-cluster-distances.R
tests/testthat/test-cluster-format.R
tests/testthat/test-cluster-model.R
tests/testthat/test-cluster-plot.R
tests/testthat/test-cluster-profiles.R
tests/testthat/test-cluster-templates.R
tests/testthat/test-plot.R
tests/testthat/test-process-read-image.R
tests/testthat/test-process-writing.R
tests/testthat/test-superseded.R
tools/processDocument/processDocument_functions_map.Rmd
tools/process_by_component_check_and_benchmark/compare.R
tools/process_by_component_check_and_benchmark/data/w0001_s02_pWOZ_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0003_s03_pLND_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0020_s02_pLND_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0024_s01_pLND_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0025_s01_pWOZ_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0061_s01_pLND_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0077_s01_pPHR_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0092_s01_pLND_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0099_s01_pPHR_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0102_s01_pPHR_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0135_s02_pWOZ_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0144_s02_pPHR_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0151_s03_pPHR_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0180_s01_pWOZ_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0233_s01_pLND_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0234_s03_pWOZ_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0239_s03_pPHR_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0264_s02_pWOZ_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0288_s02_pPHR_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0297_s03_pLND_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0368_s02_pLND_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0370_s02_pWOZ_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0409_s02_pPHR_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0439_s01_pWOZ_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0441_s01_pLND_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0451_s01_pPHR_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0484_s01_pPHR_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0527_s02_pWOZ_r02_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0604_s03_pLND_r03_microbenchmark.csv
tools/process_by_component_check_and_benchmark/data/w0664_s02_pWOZ_r01_microbenchmark.csv
tools/process_by_component_check_and_benchmark/docs/composite_docs/composite1.png
tools/process_by_component_check_and_benchmark/docs/composite_docs/composite2.png
tools/process_by_component_check_and_benchmark/docs/w0001_s02_pWOZ_r02.png
tools/process_by_component_check_and_benchmark/docs/w0003_s03_pLND_r03.png
tools/process_by_component_check_and_benchmark/docs/w0020_s02_pLND_r02.png
tools/process_by_component_check_and_benchmark/docs/w0024_s01_pLND_r02.png
tools/process_by_component_check_and_benchmark/docs/w0025_s01_pWOZ_r03.png
tools/process_by_component_check_and_benchmark/docs/w0061_s01_pLND_r02.png
tools/process_by_component_check_and_benchmark/docs/w0077_s01_pPHR_r02.png
tools/process_by_component_check_and_benchmark/docs/w0092_s01_pLND_r03.png
tools/process_by_component_check_and_benchmark/docs/w0099_s01_pPHR_r03.png
tools/process_by_component_check_and_benchmark/docs/w0102_s01_pPHR_r01.png
tools/process_by_component_check_and_benchmark/docs/w0135_s02_pWOZ_r03.png
tools/process_by_component_check_and_benchmark/docs/w0144_s02_pPHR_r02.png
tools/process_by_component_check_and_benchmark/docs/w0151_s03_pPHR_r01.png
tools/process_by_component_check_and_benchmark/docs/w0180_s01_pWOZ_r02.png
tools/process_by_component_check_and_benchmark/docs/w0233_s01_pLND_r03.png
tools/process_by_component_check_and_benchmark/docs/w0234_s03_pWOZ_r03.png
tools/process_by_component_check_and_benchmark/docs/w0239_s03_pPHR_r02.png
tools/process_by_component_check_and_benchmark/docs/w0264_s02_pWOZ_r02.png
tools/process_by_component_check_and_benchmark/docs/w0288_s02_pPHR_r02.png
tools/process_by_component_check_and_benchmark/docs/w0297_s03_pLND_r02.png
tools/process_by_component_check_and_benchmark/docs/w0368_s02_pLND_r03.png
tools/process_by_component_check_and_benchmark/docs/w0370_s02_pWOZ_r02.png
tools/process_by_component_check_and_benchmark/docs/w0409_s02_pPHR_r01.png
tools/process_by_component_check_and_benchmark/docs/w0439_s01_pWOZ_r03.png
tools/process_by_component_check_and_benchmark/docs/w0441_s01_pLND_r02.png
tools/process_by_component_check_and_benchmark/docs/w0451_s01_pPHR_r01.png
tools/process_by_component_check_and_benchmark/docs/w0484_s01_pPHR_r01.png
tools/process_by_component_check_and_benchmark/docs/w0527_s02_pWOZ_r02.png
tools/process_by_component_check_and_benchmark/docs/w0604_s03_pLND_r03.png
tools/process_by_component_check_and_benchmark/docs/w0664_s02_pWOZ_r01.png
tools/process_by_component_check_and_benchmark/microbenchmark.R
tools/process_by_component_check_and_benchmark/plots/times_faster.png
tools/process_by_component_check_and_benchmark/plots/w0001_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0001_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0001_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0001_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0016_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0016_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0016_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0016_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0023_s01_pWOZ_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0023_s01_pWOZ_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0023_s01_pWOZ_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0023_s01_pWOZ_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0032_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0032_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0032_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0032_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0080_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0080_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0080_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0080_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0124_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0124_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0124_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0124_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0138_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0138_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0138_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0138_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0229_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0229_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0229_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0229_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0264_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0264_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0264_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0264_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0354_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0354_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0354_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0354_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0383_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0383_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0383_s01_pLND_r01_by_doc_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0383_s01_pLND_r01_by_doc_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0394_s01_pLND_r01_by_comp.png
tools/process_by_component_check_and_benchmark/plots/w0394_s01_pLND_r01_by_comp_breaks.png
tools/process_by_component_check_and_benchmark/plots/w0394_s01_pLND_r01_by_comp_nodes.png
tools/process_by_component_check_and_benchmark/plots/w0394_s01_pLND_r01_by_doc.png
tools/process_by_component_check_and_benchmark/plots/w0394_s01_pLND_r01_by_doc_nodes.png
tools/profiles/baseline_w0016_s01_pLND_r01.Rprofvis
tools/profiles/baseline_w0032_s01_pLND_r01.Rprofvis
tools/profiles/make_clustering_templates.Rprofvis
tools/template/.Rapp.history
tools/template/kmRes_3source_sm0_seed110 (1).RDS
vignettes/.gitignore
vignettes/handwriter.Rmd