CSOgroup/CALDER: CALDER: a Hi-C non-linear hierarchical organization analysis tool

CALDER is a Hi-C analysis tool that allows: (1) compute chromatin domains from whole chromosome contacts; (2) derive their non-linear hierarchical organization and obtain sub-compartments; (3) compute nested sub-domains within each chromatin domain from short-range contacts

Getting started

Package details

AuthorYuanlong LIU
MaintainerWho to complain to <yliueagle@googlemail.com>
LicenseMIT
Version1.0
URL https://github.com/YuanlongLiu/CALDER/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("CSOgroup/CALDER")
CSOgroup/CALDER documentation built on June 6, 2023, 10:22 p.m.