Man pages for CellProfiler/cytominr
Methods for Image-Based Cell Profiling
| aggregate | Aggregate data based on given grouping. |
| correlation_threshold | Remove redundant variables. |
| count_na_rows | Count the number of 'NA's per variable. |
| covariance | Compute covariance matrix and vectorize. |
| cytominer-package | cytominer: Methods for Image-Based Cell Profiling |
| drop_na_columns | Remove variables with NA values. |
| drop_na_rows | Drop rows that are 'NA' in all specified variables. |
| extract_subpopulations | Extract subpopulations. |
| find_significant_pcs | Find significant PC's given the eigenvalues. |
| generalized_log | Generalized log transform data. |
| generate_component_matrix | A sparse matrix for sparse random projection. |
| husk | Husk data. |
| mark_outlier_rows | Mark outlier rows. |
| normalize | Normalize observation variables. |
| replicate_correlation | Measure replicate correlation of variables. |
| sparse_random_projection | Reduce the dimensionality of a population using sparse random... |
| spherize | Spherize data. |
| stratify | Stratify operations. |
| svd_entropy | Feature importance based on data entropy. |
| transform | Transform observation variables. |
| variable_importance | Measure variable importance. |
| variable_select | Select observation variables. |
| variance_threshold | Remove variables with near-zero variance. |
