Files in ChenFengling/RHiCDB
RHiCDB detects contact domain boundaries(CDB) on Hi-C matrix
CDB_21celltype/CDB_21celltype.tar.gz
CDB_21celltype/CDB_consistency_across_21cell.txt
CDB_21celltype/consistently_detected_CDBs.txt
DESCRIPTION
NAMESPACE
R/RHiCDB.r
R/sub_func.r
R/visHiCDB.r
README.md
RHiCDB_1.0.tar.gz
RHiCDB_manual.pdf
annotation/CTCF_hg19_site.txt
annotation/CTCF_hg38_site.txt
annotation/CTCF_mm10_site.txt
annotation/CTCF_mm9_site.txt
annotation/README.md
annotation/conserved_CDB_hg19.bed
annotation/conserved_CDB_hg38.bed
annotation/hg19.chrom.sizes.txt
annotation/hg38.chrom.sizes.txt
annotation/mm10.chrom.sizes.txt
annotation/mm9.chrom.sizes.txt
images/17_67100000_71100000_HiCmap.png
images/pipe.png
images/pipeline.png
inst/extdata/CTCF_hg19_site.txt
inst/extdata/CTCF_hg38_site.txt
inst/extdata/CTCF_mm10_site.txt
inst/extdata/CTCF_mm9_site.txt
inst/extdata/conserved_CDB_hg19.bed
inst/extdata/conserved_CDB_hg38.bed
inst/extdata/hg19.chrom.sizes.txt
inst/extdata/hg38.chrom.sizes.txt
inst/extdata/mm10.chrom.sizes.txt
inst/extdata/mm9.chrom.sizes.txt
man/RHiCDB.Rd
man/visHiCDB.Rd
