Fast computation of multivariate analyses of small (10s to 100s markers) to big (1000s to 100000s) genotype data. Runs Principal Component Analysis allowing for centering, z-score standardization and scaling for genetic drift, projection of ancient samples to modern genetic space and multivariate tests for differences in group location (Permutation-Based Multivariate Analysis of Variance) and dispersion (Permutation-Based Multivariate Analysis of Dispersion).
Package details |
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Maintainer | Christian Huber <christian.domitian.huber@gmail.com> |
License | MIT + file LICENSE |
Version | 1.1.0 |
URL | https://christianhuber.github.io/smartsnp/ |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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