ChristianHuber/smartsnp: Fast Multivariate Analyses of Big Genomic Data
Fast computation of multivariate analyses of small (10s to 100s markers) to big (1000s to 100000s) genotype data. Runs Principal Component Analysis allowing for centering, z-score standardization and scaling for genetic drift, projection of ancient samples to modern genetic space and multivariate tests for differences in group location (Permutation-Based Multivariate Analysis of Variance) and dispersion (Permutation-Based Multivariate Analysis of Dispersion).
Getting started
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Package details |
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| Maintainer | Christian Huber <christian.domitian.huber@gmail.com> |
| License | MIT + file LICENSE |
| Version | 1.1.0 |
| URL | https://christianhuber.github.io/smartsnp/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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